RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 NOX1Q9Y5S8 564 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 HEATR1Q9H583 2144 aaKnown RBP6.56□□□□□ -1.36
NEK3-201ENST00000550331 A0A0B4J2E0 115 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 A0A1B0GX12 115 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 B4DSR2 109 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 MS4A18H0YCH9 400 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 M0R3G1 203 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 TCF21O43680 179 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 TPST1O60507 370 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 SERPINB7O75635 380 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 SEC14L2O76054 403 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 HPRP00739 348 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 HLA-HP01893 362 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 BGLAPP02818 100 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 ADRA2AP08913 450 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 ZNF35P13682 527 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 ZNF14P17017 642 aaPredicted RBP6.56□□□□□ -1.36
NEK3-201ENST00000550331 IL2RGP31785 369 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 GLRXP35754 106 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 RPS23P62266 143 aaKnown RBP6.56□□□□□ -1.36
NEK3-201ENST00000550331 CDK6Q00534 326 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 IL1RL1Q01638 556 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 PUDPQ08623 228 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 TRMT5Q32P41 509 aaKnown RBP6.56□□□□□ -1.36
NEK3-201ENST00000550331 MS4A18Q3C1V0 323 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 PHYHD1Q5SRE7 291 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 REP15Q6BDI9 236 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 REEP3Q6NUK4 255 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 EPGNQ6UW88 154 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 NHLRC1Q6VVB1 395 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 ZNF813Q6ZN06 617 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 PXKQ7Z7A4 578 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 COMTD1Q86VU5 262 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 MEX3DQ86XN8 651 aaKnown RBP6.56□□□□□ -1.36
NEK3-201ENST00000550331 MSRB3Q8IXL7 192 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 NFKBIDQ8NI38 313 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 ZNF75AQ96N20 296 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 TMEM43Q9BTV4 400 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 ULBP2Q9BZM5 246 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 TMEM38AQ9H6F2 299 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 TMEM27Q9HBJ8 222 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 NKIRAS1Q9NYS0 192 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 SELENONQ9NZV5 590 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 FRRS1LQ9P0K9 344 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 REV1Q9UBZ9 1251 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 CORO2BQ9UQ03 480 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 USH1CQ9Y6N9 552 aa6.56□□□□□ -1.36
NEK3-201ENST00000550331 TRBV5-3A0A0A0MS03 114 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 SH3PXD2BA1X283 911 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 ZNF726A6NNF4 738 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 POLR3GO15318 223 aaPredicted RBP6.55□□□□□ -1.36
NEK3-201ENST00000550331 FMO6PO60774 539 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 ENTPD5O75356 428 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 UBL3O95164 117 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 TGDSO95455 350 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 RAB36O95755 333 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 MT-ATP6P00846 226 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 CD79AP11912 226 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 HLA-DOBP13765 273 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 B4GALT1P15291 398 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 GPX2P18283 190 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 ACHEP22303 614 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 CBLP22681 906 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 SRP14P37108 136 aaKnown RBP6.55□□□□□ -1.36
NEK3-201ENST00000550331 RGS8P57771 180 aaPredicted RBP6.55□□□□□ -1.36
NEK3-201ENST00000550331 MRPS11P82912 194 aaKnown RBP6.55□□□□□ -1.36
NEK3-201ENST00000550331 GALK2Q01415 458 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 PMS2P3Q13401 168 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 TRIP10Q15642 601 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 ZNF124Q15973 351 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 FXNQ16595 210 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 GLIPR1L2Q4G1C9 344 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 ELFN2Q5R3F8 820 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 CARD17Q5XLA6 110 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 RANBP3LQ86VV4 465 aaPredicted RBP6.55□□□□□ -1.36
NEK3-201ENST00000550331 C10orf111Q8N326 155 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.55□□□□□ -1.36
NEK3-201ENST00000550331 OR6N1Q8NGY5 312 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 RDH5Q92781 318 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 SPDL1Q96EA4 605 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 C7orf26Q96N11 449 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 MOGAT1Q96PD6 335 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 ZNF607Q96SK3 696 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 FOXB1Q99853 325 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 EMC6Q9BV81 110 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 MRPL37Q9BZE1 423 aaKnown RBP6.55□□□□□ -1.36
NEK3-201ENST00000550331 TPK1Q9H3S4 243 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 TCF7L2Q9NQB0 619 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 MED29Q9NX70 200 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 ZNF224Q9NZL3 707 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 VAPAQ9P0L0 249 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 SLC7A8Q9UHI5 535 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 SLC13A4Q9UKG4 626 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 POFUT2Q9Y2G5 429 aa6.55□□□□□ -1.36
NEK3-201ENST00000550331 A0A0A6YYJ9 748 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 EVPLLA8MZ36 301 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 LYNX1G3V0Z9 82 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 PLPP3O14495 311 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 MFN2O95140 757 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 TFP02787 698 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms