RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 BCL2L2Q92843 193 aaPredicted RBP16.98■□□□□ 0.31
DDX54-207ENST00000550016 PIK3IP1Q96FE7 263 aa16.98■□□□□ 0.31
DDX54-207ENST00000550016 GPA33Q99795 319 aa16.98■□□□□ 0.31
DDX54-207ENST00000550016 MRPL13Q9BYD1 178 aaKnown RBP16.98■□□□□ 0.31
DDX54-207ENST00000550016 ULBP2Q9BZM5 246 aa16.98■□□□□ 0.31
DDX54-207ENST00000550016 CCM2LQ9NUG4 571 aaPredicted RBP16.98■□□□□ 0.31
DDX54-207ENST00000550016 VNN3Q9NY84 501 aa16.98■□□□□ 0.31
DDX54-207ENST00000550016 ZNF346Q9UL40 294 aaKnown RBP16.98■□□□□ 0.31
DDX54-207ENST00000550016 AMDHD2Q9Y303 409 aa16.98■□□□□ 0.31
DDX54-207ENST00000550016 SAMHD1Q9Y3Z3 626 aaKnown RBP16.98■□□□□ 0.31
DDX54-207ENST00000550016 SLC25A15Q9Y619 301 aa16.98■□□□□ 0.31
DDX54-207ENST00000550016 CADP27708 2225 aa16.98■□□□□ 0.31
DDX54-207ENST00000550016 TACC2O95359 2948 aa16.98■□□□□ 0.31
DDX54-207ENST00000550016 ZNF99A8MXY4 864 aaPredicted RBP16.97■□□□□ 0.31
DDX54-207ENST00000550016 TRMUO75648 421 aaKnown RBP16.97■□□□□ 0.31
DDX54-207ENST00000550016 CIB2O75838 187 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 CCNB2O95067 398 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 NDUFB2O95178 105 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 HOXB1P14653 301 aaPredicted RBP16.97■□□□□ 0.31
DDX54-207ENST00000550016 ZNF26P17031 533 aaPredicted RBP16.97■□□□□ 0.31
DDX54-207ENST00000550016 FPR3P25089 353 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 HOXC12P31275 282 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 GSSP48637 474 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 ERFP50548 548 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 CLRN1P58418 232 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 RUNX1T1Q06455 604 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 PPP1R8Q12972 351 aaKnown RBP16.97■□□□□ 0.31
DDX54-207ENST00000550016 TOP3AQ13472 1001 aaPredicted RBP16.97■□□□□ 0.31
DDX54-207ENST00000550016 GK3PQ14409 553 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 PGBD2Q6P3X8 592 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 LRFN4Q6PJG9 635 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 MAGEE2Q8TD90 523 aaPredicted RBP16.97■□□□□ 0.31
DDX54-207ENST00000550016 SLCO4A1Q96BD0 722 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 LURAP1Q96LR2 239 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 POFUT2Q9Y2G5 429 aa16.97■□□□□ 0.31
DDX54-207ENST00000550016 AKAP6Q13023 2319 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.96■□□□□ 0.31
DDX54-207ENST00000550016 GNGT2O14610 69 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 FKBP6O75344 327 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 CD14P08571 375 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 LOXP28300 417 aaPredicted RBP16.96■□□□□ 0.31
DDX54-207ENST00000550016 NR1H2P55055 460 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 ERVK-25P63136 954 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 TSPAN31Q12999 210 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 HIST3H3Q16695 136 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 MICAQ29983 383 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 TBRG1Q3YBR2 411 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 HIKESHIQ53FT3 197 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 FAM205BPQ63HN1 556 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 KLHL24Q6TFL4 600 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 SEZ6L2Q6UXD5 910 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 CDC20BQ86Y33 519 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 SYT14Q8NB59 555 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 UTP4Q969X6 686 aaKnown RBP16.96■□□□□ 0.31
DDX54-207ENST00000550016 PLPPR2Q96GM1 343 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 KATNB1Q9BVA0 655 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 OBP2BQ9NPH6 170 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 U3KQV3 271 aa16.96■□□□□ 0.31
DDX54-207ENST00000550016 NOTCH2Q04721 2471 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 A0A1W2PR80 420 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 A6NIZ1 184 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 WNT11O96014 354 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 QDPRP09417 244 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 ACVR1BP36896 505 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 UBE2NP61088 152 aaKnown RBP16.95■□□□□ 0.3
DDX54-207ENST00000550016 RAP1BP61224 184 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 RAP1AP62834 184 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 ZNF770Q6IQ21 691 aaPredicted RBP16.95■□□□□ 0.3
DDX54-207ENST00000550016 SMARCD3Q6STE5 483 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 ZNF627Q7L945 461 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 ARIH2OSQ8N7S6 290 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 NOXO1Q8NFA2 376 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 OR9Q2Q8NGE9 314 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 ZNF519Q8TB69 540 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 HDAC2Q92769 488 aaKnown RBP16.95■□□□□ 0.3
DDX54-207ENST00000550016 TSPAN32Q96QS1 320 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 KCNK17Q96T54 332 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 NELFAQ9H3P2 528 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 ESRP2Q9H6T0 727 aaKnown RBP16.95■□□□□ 0.3
DDX54-207ENST00000550016 GRHPRQ9UBQ7 328 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 MAGED1Q9Y5V3 778 aaPredicted RBP16.95■□□□□ 0.3
DDX54-207ENST00000550016 ANKRD17O75179 2603 aaKnown RBP16.95■□□□□ 0.3
DDX54-207ENST00000550016 SPG11Q96JI7 2443 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 ROS1P08922 2347 aa16.95■□□□□ 0.3
DDX54-207ENST00000550016 A0A096LPE4 126 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 ARPC4-TTLL3A0A0A6YYG9 625 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 A0A1W2PPZ6 126 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 GASTP01350 101 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 PAX7P23759 505 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 FXYD6P3P58550 94 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 CCNIQ14094 377 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 NCMAPQ5T1S8 102 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 GPR139Q6DWJ6 353 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 KLHL17Q6TDP4 642 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 THSD4Q6ZMP0 1018 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 DPY19L2P2Q6ZN68 376 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 CCDC36Q8IYA8 594 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 MCHR2Q969V1 340 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 HS3ST6Q96QI5 342 aa16.94■□□□□ 0.3
DDX54-207ENST00000550016 GPX7Q96SL4 187 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms