RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 RINLQ6ZS11 566 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 PIWIL3Q7Z3Z3 882 aaKnown RBP11.04□□□□□ -0.64
PTCH1-218ENST00000548945 RANBP3LQ86VV4 465 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-218ENST00000548945 MSRB3Q8IXL7 192 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 TEX29Q8N6K0 151 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 OR6N1Q8NGY5 312 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 CLDND2Q8NHS1 167 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 BCAS4Q8TDM0 211 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 TMEM186Q96B77 213 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 TXNDC15Q96J42 360 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 C7orf26Q96N11 449 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 CCT8L2Q96SF2 557 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 ZNF416Q9BWM5 594 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 FGFR1OP2Q9NVK5 253 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 HIF1ANQ9NWT6 349 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 MED29Q9NX70 200 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 SLC7A8Q9UHI5 535 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 CORO2BQ9UQ03 480 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 GRIP1Q9Y3R0 1128 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 NDUFAB1O14561 156 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 TPST1O60507 370 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 FMO6PO60774 539 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 SERPINB7O75635 380 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 HPXP02790 462 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 SERPINA5P05154 406 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 MSMBP08118 114 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 SLC6A2P23975 617 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 GIPRP48546 466 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 CSNK1A1P48729 337 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 AQP5P55064 265 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 STX1BP61266 288 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 CAMK2DQ13557 499 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 GLIPR1L2Q4G1C9 344 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 BLOC1S3Q6QNY0 202 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 EPGNQ6UW88 154 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 C12orf54Q6X4T0 127 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 SEMA6DQ8NFY4 1073 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 OR5J2Q8NH18 312 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 MOGAT1Q96PD6 335 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 SYT3Q9BQG1 590 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 FAM107BQ9H098 131 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 SLCO1B3Q9NPD5 702 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-218ENST00000548945 GPR160Q9UJ42 338 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 SLC13A4Q9UKG4 626 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 USH1CQ9Y6N9 552 aa11.03□□□□□ -0.64
PTCH1-218ENST00000548945 TRBV5-3A0A0A0MS03 114 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 TRAV20A0A0B4J274 112 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 SLC22A23A1A5C7 686 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 TPST2O60704 377 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 TGDSO95455 350 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 GAAP10253 952 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 GPX2P18283 190 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 AHCYP23526 432 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 COL8A2P25067 703 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 ALDH3B1P43353 468 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 CDH12P55289 794 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 SELENOVP59797 346 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 SCARB2Q14108 478 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 ZNF613Q6PF04 617 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 LINC00114Q6XXX2 140 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 DPPA2Q7Z7J5 298 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 LRP11Q86VZ4 500 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 ARMC8Q8IUR7 673 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 FUNDC1Q8IVP5 155 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 WDFY1Q8IWB7 410 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 C10orf111Q8N326 155 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-218ENST00000548945 OR51F2Q8NH61 342 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 OR6X1Q8NH79 312 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 RNF217Q8TC41 542 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 TMEM54Q969K7 222 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 SPDL1Q96EA4 605 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 C1orf198Q9H425 327 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 METTL17Q9H7H0 456 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-218ENST00000548945 ZNF275Q9NSD4 429 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-218ENST00000548945 GLTPQ9NZD2 209 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 VAPAQ9P0L0 249 aa11.02□□□□□ -0.65
PTCH1-218ENST00000548945 MYEF2Q9P2K5 600 aaKnown RBP11.02□□□□□ -0.65
PTCH1-218ENST00000548945 EVPLLA8MZ36 301 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 FAM157AC9JC47 383 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 CHP2O43745 196 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 RP2O75695 350 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 MFN2O95140 757 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 VENTXO95231 258 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 ADORA3P0DMS8 318 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 OR8G3PP0DMU2 310 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 TROVE2P10155 538 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTCH1-218ENST00000548945 ANPEPP15144 967 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 TCN1P20061 433 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-218ENST00000548945 CFPP27918 469 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 COMPP49747 757 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-218ENST00000548945 BIDP55957 195 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 LMO4P61968 165 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 ZP4Q12836 540 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 RAB39AQ14964 217 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 MAD2L1BPQ15013 274 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-218ENST00000548945 PCGF3Q3KNV8 242 aa11.01□□□□□ -0.65
PTCH1-218ENST00000548945 NRN1LQ496H8 165 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms