RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 CXADRP78310 365 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 TPRA1Q86W33 373 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 LIX1LQ8IVB5 337 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 SPERTQ8NA61 448 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 ADAMTS18Q8TE60 1221 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 C10orf90Q96M02 699 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 KLHL15Q96M94 604 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 MFFQ9GZY8 342 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 CHMP1AQ9HD42 196 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-209ENST00000548860 KIF26BQ2KJY2 2108 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 ANAPC1Q9H1A4 1944 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 ICOSLGO75144 302 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 SCGB1D2O95969 90 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 HSD11B1P28845 292 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 RORAP35398 523 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 NANOS3P60323 173 aaKnown RBP12.92□□□□□ -0.34
CACNB3-209ENST00000548860 TRAM1Q15629 374 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 TOR2AQ5JU69 321 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 PRAMEF20Q5VT98 475 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 TMEM225Q6GV28 225 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 OR4S1Q8NGB4 309 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 OR13C9Q8NGT0 318 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 ADAMTS14Q8WXS8 1223 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 ZNF436Q9C0F3 470 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-209ENST00000548860 ZMIZ1Q9ULJ6 1067 aa12.92□□□□□ -0.34
CACNB3-209ENST00000548860 TMEM235A6NFC5 223 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 KCNAB3O43448 404 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 RP2O75695 350 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 AK1P00568 194 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 CD3DP04234 171 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 THBS1P07996 1170 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 ITGA5P08648 1049 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 IL9P15248 144 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 PRKACBP22694 351 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 FRKP42685 505 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-209ENST00000548860 DIO1P49895 249 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 MLC1Q15049 377 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 PHF19Q5T6S3 580 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 WDR89Q96FK6 387 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-209ENST00000548860 OR2M2Q96R28 347 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 MED18Q9BUE0 208 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 NARFLQ9H6Q4 476 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 NIPAL2Q9H841 368 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 SLCO1C1Q9NYB5 712 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 ABRACLQ9P1F3 81 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 COA3Q9Y2R0 106 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-209ENST00000548860 REV3LO60673 3130 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 A0A0B4J2E0 115 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 A0A1B0GX12 115 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 PYCARD-AS1I3L0S3 204 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 TRIM3O75382 744 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-209ENST00000548860 RIDAP52758 137 aaKnown RBP12.91□□□□□ -0.34
CACNB3-209ENST00000548860 NKAPLQ5M9Q1 402 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 ZCCHC12Q6PEW1 402 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 SLC35F3Q8IY50 421 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 CMBLQ96DG6 245 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 LMAN1LQ9HAT1 526 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 DNAJB12Q9NXW2 375 aaKnown RBP12.91□□□□□ -0.34
CACNB3-209ENST00000548860 CAMK2AQ9UQM7 478 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 MPDZO75970 2070 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 PRAMEF26H0Y7S4 382 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 SLC6A1P30531 599 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 RABIFP47224 123 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 TAS2R20P59543 309 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 PRPS1P60891 318 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 CAMK2DQ13557 499 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 ALKBH1Q13686 389 aaKnown RBP12.91□□□□□ -0.34
CACNB3-209ENST00000548860 UNQ6126/PRO20091Q6UXV3 157 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 CD300LDQ6UXZ3 194 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 BTN2A1Q7KYR7 527 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 KIAA1143Q96AT1 154 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-209ENST00000548860 C8orf44Q96CB5 159 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 METTL7AQ9H8H3 244 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 CCDC85CA6NKD9 419 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 H0YIG0 161 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 MPIG6BO95866 241 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 GABRG2P18507 467 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 FMODQ06828 376 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 Q499Y3 187 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 STAC2Q6ZMT1 411 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 IDO2Q6ZQW0 420 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 TOR1AIP2Q8NFQ8 470 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 MAFIPQ8WZ33 124 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 LPAR4Q99677 370 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 KLHDC2Q9Y2U9 406 aa12.91□□□□□ -0.34
CACNB3-209ENST00000548860 TMEM269A0A1B0GVZ9 245 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 A0A1W2PQF6 199 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 EPOPA6NHQ4 379 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 ACOT7O00154 380 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 AKR7A3O95154 331 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 ECDO95905 644 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-209ENST00000548860 CFDP00746 253 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-209ENST00000548860 ZNF20P17024 532 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 KIR2DL1P43626 348 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-209ENST00000548860 UBE2NLQ5JXB2 153 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 METTL11BQ5VVY1 283 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 WBP2NLQ6ICG8 309 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 FAM198BQ6UWH4 519 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 NLRC3Q7RTR2 1065 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 ZNF584Q8IVC4 421 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms