RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 GSTT2P0CG29 244 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 GSTT2BP0CG30 244 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 IFNGR1P15260 489 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 POU3F1Q03052 451 aaPredicted RBP9.99□□□□□ -0.81
CUX1-212ENST00000547394 GRINAQ7Z429 371 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 WDR5BQ86VZ2 330 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 GALNT6Q8NCL4 622 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 C19orf18Q8NEA5 215 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 GAL3ST1Q99999 423 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 SIAEQ9HAT2 523 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 MYOTQ9UBF9 498 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 N6AMT1Q9Y5N5 214 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 SPENQ96T58 3664 aaKnown RBP9.98□□□□□ -0.81
CUX1-212ENST00000547394 A8MVM7 634 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 OGG1O15527 345 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 RENP00797 406 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 MAS1P04201 325 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 PLA2G7Q13093 441 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 GPR50Q13585 617 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 HSD17B12Q53GQ0 312 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 OR7E24Q6IFN5 339 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 GPAT4Q86UL3 456 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 OR2T4Q8NH00 348 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 ZNF671Q8TAW3 534 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 LGALS14Q8TCE9 139 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 JSRP1Q96MG2 331 aaPredicted RBP9.98□□□□□ -0.81
CUX1-212ENST00000547394 C5orf34Q96MH7 638 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 COQ7Q99807 217 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 DEFB126Q9BYW3 111 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 EVA1AQ9H8M9 152 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 COA3Q9Y2R0 106 aaPredicted RBP9.98□□□□□ -0.81
CUX1-212ENST00000547394 A0A1W2PPC1 479 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 PLPP3O14495 311 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 FLRT2O43155 660 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 RAMP1O60894 148 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 UPK3AO75631 287 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 CCNKO75909 580 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 CCKBRP32239 447 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 INPP1P49441 399 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 TAS2R43P59537 309 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 RSBN1Q5VWQ0 802 aaPredicted RBP9.98□□□□□ -0.81
CUX1-212ENST00000547394 CARD17Q5XLA6 110 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 MZT2AQ6P582 158 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 RPL22L1Q6P5R6 122 aaKnown RBP9.98□□□□□ -0.81
CUX1-212ENST00000547394 SLC16A9Q7RTY1 509 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 ENKURQ8TC29 256 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 INTS14Q96SY0 518 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 MRPL22Q9NWU5 206 aaKnown RBP9.98□□□□□ -0.81
CUX1-212ENST00000547394 PPP4R1LQ9P1A2 415 aa9.98□□□□□ -0.81
CUX1-212ENST00000547394 A0A1W2PQD3 144 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 PRSS37A4D1T9 235 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 OR6C76A6NM76 312 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 NPIPB7O75200 414 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 EPXP11678 715 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 RPL27P61353 136 aaKnown RBP9.97□□□□□ -0.81
CUX1-212ENST00000547394 RPS15P62841 145 aaKnown RBP9.97□□□□□ -0.81
CUX1-212ENST00000547394 EEF1A1P5Q5VTE0 462 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 GDPD1Q8N9F7 314 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 FAM181AQ8N9Y4 354 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 HGDQ93099 445 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 MAP6Q96JE9 813 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 RASL10BQ96S79 203 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 TTYH2Q9BSA4 534 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 ARRDC1-AS1Q9H2J1 176 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 ELOVL3Q9HB03 270 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 PRMT8Q9NR22 394 aaPredicted RBP9.97□□□□□ -0.81
CUX1-212ENST00000547394 NUFIP1Q9UHK0 495 aaKnown RBP9.97□□□□□ -0.81
CUX1-212ENST00000547394 FBXL3Q9UKT7 428 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 B9D1Q9UPM9 204 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 PCDHGB7Q9Y5F8 929 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 B3GALT1Q9Y5Z6 326 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 RIF1Q5UIP0 2472 aaKnown RBP9.97□□□□□ -0.81
CUX1-212ENST00000547394 TRAV8-7A0A075B6U6 113 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 MEIOCA2RUB1 952 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 ZNF814B7Z6K7 855 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 TOX3O15405 576 aaPredicted RBP9.97□□□□□ -0.81
CUX1-212ENST00000547394 IDH3BO43837 385 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 FZD7O75084 574 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 PNPP00491 289 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 KRT8P05787 483 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 UMODP07911 640 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 ANKRD34CP0C6C1 535 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 SRMP19623 302 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 ADAM8P78325 824 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 DGCR2P98153 550 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 SGCBQ16585 318 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 ZNF684Q5T5D7 378 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 METAP1DQ6UB28 335 aaPredicted RBP9.97□□□□□ -0.81
CUX1-212ENST00000547394 FAM220AQ7Z4H9 259 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 CDC20BQ86Y33 519 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 SYS1Q8N2H4 156 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 PIAS4Q8N2W9 510 aaPredicted RBP9.97□□□□□ -0.81
CUX1-212ENST00000547394 PRSS35Q8N3Z0 413 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 MS4A15Q8N5U1 240 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 LIPHQ8WWY8 451 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 NAT6Q93015 286 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 NXPE2Q96DL1 559 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 SOSTQ9BQB4 213 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 BOLA1Q9Y3E2 137 aa9.97□□□□□ -0.81
CUX1-212ENST00000547394 LOC101059948A0A1B0GTJ6 334 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms