RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 SLC25A43Q8WUT9 341 aaPredicted RBP7.58□□□□□ -1.2
VPS29-203ENST00000546588 RAB24Q969Q5 203 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 THOC3Q96J01 351 aaKnown RBP7.58□□□□□ -1.2
VPS29-203ENST00000546588 MRPS26Q9BYN8 205 aaKnown RBP7.58□□□□□ -1.2
VPS29-203ENST00000546588 POTEKPQ9BYX7 375 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 DPH1Q9BZG8 443 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 NDEL1Q9GZM8 345 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 OR52D1Q9H346 318 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 METTL7AQ9H8H3 244 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 MCCC2Q9HCC0 563 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 CCNB1IP1Q9NPC3 277 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 NRIP3Q9NQ35 241 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 SACM1LQ9NTJ5 587 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 CNOT2Q9NZN8 540 aaKnown RBP7.58□□□□□ -1.2
VPS29-203ENST00000546588 KLRF1Q9NZS2 232 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 ZNF337Q9Y3M9 751 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 TRAV36DV7A0A075B6V5 113 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 TMED7-TICAM2A0A0A6YYA0 188 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 A0A0A6YYJ9 748 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 A0A1W2PNV4 684 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 LRRC3CA6NJW4 275 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 C17orf51A8MQB3 221 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 KDM4EB2RXH2 506 aaPredicted RBP7.57□□□□□ -1.2
VPS29-203ENST00000546588 IMPA2O14732 288 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 SURF4O15260 269 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 OR2T1O43869 369 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 HTR1AP08908 422 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 GP1BBP13224 206 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 POU2F1P14859 743 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 ACVR2AP27037 513 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 GPR4P46093 362 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 ALDH3B2P48448 385 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 CYB561P49447 251 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 PCYT1AP49585 367 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 DSCR4P56555 118 aaPredicted RBP7.57□□□□□ -1.2
VPS29-203ENST00000546588 POLR2GP62487 172 aaKnown RBP eCLIP7.57□□□□□ -1.2
VPS29-203ENST00000546588 FOXO1Q12778 655 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 NFATC3Q12968 1075 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 SELENBP1Q13228 472 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 MFAP5Q13361 173 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 MFSD13AQ14CX5 517 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 TGIF1Q15583 401 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 CR1LQ2VPA4 569 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 PGGHGQ32M88 737 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 ZNF362Q5T0B9 420 aaPredicted RBP7.57□□□□□ -1.2
VPS29-203ENST00000546588 TIGD3Q6B0B8 471 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 C3orf33Q6P1S2 294 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 IL20RBQ6UXL0 311 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 FAM122BQ7Z309 247 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 MARCH9Q86YJ5 346 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 C1QL4Q86Z23 238 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 BEST3Q8N1M1 668 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 CADM2Q8N3J6 435 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 GALNT16Q8N428 558 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 TMEM156Q8N614 296 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 PSD4Q8NDX1 1056 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 FANK1Q8TC84 345 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 HAS2Q92819 552 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 SGTBQ96EQ0 304 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 SCMH1Q96GD3 660 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 SNX18Q96RF0 628 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 DDOQ99489 341 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 OR2B2Q9GZK3 357 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 DSN1Q9H410 356 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 EGLN3Q9H6Z9 239 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 PTGES2Q9H7Z7 377 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 RPRD1BQ9NQG5 326 aaKnown RBP7.57□□□□□ -1.2
VPS29-203ENST00000546588 CMC2Q9NRP2 79 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 PAK1IP1Q9NWT1 392 aaPredicted RBP7.57□□□□□ -1.2
VPS29-203ENST00000546588 SELENONQ9NZV5 590 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 CHRNA9Q9UGM1 479 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 SCOCQ9UIL1 159 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 TMED7Q9Y3B3 224 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 FRYQ5TBA9 3013 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 CEP250Q9BV73 2442 aa7.57□□□□□ -1.2
VPS29-203ENST00000546588 A0A087WXM4 84 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 TMEM72A0PK05 275 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 TRABD2BA6NFA1 517 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 EFCAB9A8MZ26 197 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 CBR3O75828 277 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 NDUFB2O95178 105 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 SOX14O95416 240 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 HMGN1P05114 100 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 TFAP2AP05549 437 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 WT1P19544 449 aaPredicted RBP7.56□□□□□ -1.2
VPS29-203ENST00000546588 SRD5A2P31213 254 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 DIO1P49895 249 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 ZNF41P51814 821 aaPredicted RBP7.56□□□□□ -1.2
VPS29-203ENST00000546588 LTBQ06643 244 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 CRYZQ08257 329 aaKnown RBP7.56□□□□□ -1.2
VPS29-203ENST00000546588 ZP4Q12836 540 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 FOXF1Q12946 379 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 GINS1Q14691 196 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 SGCBQ16585 318 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 NXNL2Q5VZ03 156 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 B3GNTL1Q67FW5 361 aaPredicted RBP7.56□□□□□ -1.2
VPS29-203ENST00000546588 SIGIRRQ6IA17 410 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 ACSM5Q6NUN0 579 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 ZNF773Q6PK81 442 aa7.56□□□□□ -1.2
VPS29-203ENST00000546588 ARSKQ6UWY0 536 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms