RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 RAB39AQ14964 217 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 REEP3Q6NUK4 255 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 LRFN4Q6PJG9 635 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 UGT2A3Q6UWM9 527 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 PTOV1Q86YD1 416 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 OR4D11Q8NGI4 311 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 MGARPQ8TDB4 240 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 SEPHS2Q99611 448 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 ARHGDIGQ99819 225 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 CENPHQ9H3R5 247 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 MS4A5Q9H3V2 200 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 RAD21L1Q9H4I0 556 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 NARFLQ9H6Q4 476 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 METTL17Q9H7H0 456 aaPredicted RBP10.73□□□□□ -0.69
COPS7A-221ENST00000546229 TAS2R5Q9NYW4 299 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 TREM2Q9NZC2 230 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 RPS6KB2Q9UBS0 482 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 SLC7A8Q9UHI5 535 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 USH1CQ9Y6N9 552 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 PRKDCP78527 4128 aaKnown RBP10.73□□□□□ -0.69
COPS7A-221ENST00000546229 TMEM247A6NEH6 219 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 FMO6PO60774 539 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 UBL3O95164 117 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 SERPINA5P05154 406 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 PGA4P0DJD7 388 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 PGA3P0DJD8 388 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 NQO1P15559 274 aaKnown RBP10.72□□□□□ -0.69
COPS7A-221ENST00000546229 PCMT1P22061 227 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 CSNK1A1P48729 337 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 CRYBA2P53672 197 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 RGS8P57771 180 aaPredicted RBP10.72□□□□□ -0.69
COPS7A-221ENST00000546229 HILS1P60008 231 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 ERVS71-1P61550 626 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 RPS23P62266 143 aaKnown RBP10.72□□□□□ -0.69
COPS7A-221ENST00000546229 ZNF74Q16587 644 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 HIST3H3Q16695 136 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 TRMT5Q32P41 509 aaKnown RBP10.72□□□□□ -0.69
COPS7A-221ENST00000546229 DLEU7Q6UYE1 221 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 USP43Q70EL4 1123 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 OR5J2Q8NH18 312 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 OR6X1Q8NH79 312 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 GTF3AQ92664 365 aaKnown RBP10.72□□□□□ -0.69
COPS7A-221ENST00000546229 EPYCQ99645 322 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 EBF4Q9BQW3 602 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 ASPNQ9BXN1 380 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 TMPRSS13Q9BYE2 586 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 LPAR2Q9HBW0 351 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 TMEM38BQ9NVV0 291 aa10.72□□□□□ -0.69
COPS7A-221ENST00000546229 TMEM89A2RUT3 159 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 VSTM5A8MXK1 200 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 C5orf58C9J3I9 102 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 M0R3H8 397 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 CHP2O43745 196 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 SNAP29O95721 258 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 RAB36O95755 333 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 MT-ATP6P00846 226 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 MMP7P09237 267 aaPredicted RBP10.71□□□□□ -0.69
COPS7A-221ENST00000546229 EGR1P18146 543 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 ZNF133P52736 654 aaPredicted RBP10.71□□□□□ -0.69
COPS7A-221ENST00000546229 BIDP55957 195 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 TMEM33P57088 247 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 RUNX1T1Q06455 604 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 ZP4Q12836 540 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 PMS2P3Q13401 168 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 SCARB2Q14108 478 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 DUSP7Q16829 419 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 ZNF613Q6PF04 617 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 PIWIL3Q7Z3Z3 882 aaKnown RBP10.71□□□□□ -0.69
COPS7A-221ENST00000546229 SLC22A24Q8N4F4 322 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 OR6T1Q8NGN1 323 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 OR51F2Q8NH61 342 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 NMD3Q96D46 503 aaKnown RBP10.71□□□□□ -0.69
COPS7A-221ENST00000546229 SPDL1Q96EA4 605 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 LRRC37BQ96QE4 947 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 PCDHAC1Q9H158 963 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 CACYBPQ9HB71 228 aaKnown RBP10.71□□□□□ -0.69
COPS7A-221ENST00000546229 B3GAT2Q9NPZ5 323 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 ESM1Q9NQ30 184 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 GLTPQ9NZD2 209 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 METRNQ9UJH8 293 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 POFUT2Q9Y2G5 429 aa10.71□□□□□ -0.69
COPS7A-221ENST00000546229 TRAV20A0A0B4J274 112 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 PRORSD1PA6NEY8 169 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 C17orf100A8MU93 164 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 PNPP00491 289 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 TSPAN19P0C672 248 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 ASAH2BP0C7U1 165 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 CD247P20963 164 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 AQP1P29972 269 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 IDH3AP50213 366 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 MAGOHP61326 146 aaKnown RBP10.7□□□□□ -0.7
COPS7A-221ENST00000546229 SELPLGQ14242 412 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 MELKQ14680 651 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 SLC35D2Q76EJ3 337 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 C1QL2Q7Z5L3 287 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 RBM45Q8IUH3 476 aaKnown RBP10.7□□□□□ -0.7
COPS7A-221ENST00000546229 LRRC17Q8N6Y2 441 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 HIPK4Q8NE63 616 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 OR6N1Q8NGY5 312 aa10.7□□□□□ -0.7
COPS7A-221ENST00000546229 FAM216AQ8WUB2 273 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms