RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 HOXB1P14653 301 aaPredicted RBP12.92□□□□□ -0.34
SRP54-202ENST00000546080 ZNF10P21506 573 aaPredicted RBP12.92□□□□□ -0.34
SRP54-202ENST00000546080 RORAP35398 523 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 DLSTP36957 453 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 MAP3K8P41279 467 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 RAB13P51153 203 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 TAS2R19P59542 299 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 SSBP1Q04837 148 aaKnown RBP12.92□□□□□ -0.34
SRP54-202ENST00000546080 TAF13Q15543 124 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 PRICKLE4Q2TBC4 344 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 LRRC37A5PQ49AS3 106 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 PAN3Q58A45 887 aaKnown RBP12.92□□□□□ -0.34
SRP54-202ENST00000546080 BEX5Q5H9J7 111 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 ZNF550Q7Z398 422 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 ZNF595Q8IYB9 648 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 PUSL1Q8N0Z8 303 aaKnown RBP12.92□□□□□ -0.34
SRP54-202ENST00000546080 LCN9Q8WX39 176 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 ASF1BQ9NVP2 202 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 PCDHB10Q9UN67 800 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 MUC22E2RYF6 1773 aaPredicted RBP12.91□□□□□ -0.34
SRP54-202ENST00000546080 TMEM218A2RU14 115 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 RAB19A4D1S5 217 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 RAB3DO95716 219 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 SMIM10L1P0DMW3 83 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 SLC25A4P12235 298 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 CEBPBP17676 345 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 ISXQ2M1V0 245 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 ODF4Q2M2E3 257 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 ENPP7Q6UWV6 458 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 LDLRAD3Q86YD5 345 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 TMEFF1Q8IYR6 380 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 OR1S2Q8NGQ3 325 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 OR1J2Q8NGS2 313 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 OR10AC1Q8NH08 325 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 GPR148Q8TDV2 347 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 SMIM10Q96HG1 83 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 TSSK2Q96PF2 358 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 SLC25A21Q9BQT8 299 aaPredicted RBP12.91□□□□□ -0.34
SRP54-202ENST00000546080 UQCC2Q9BRT2 126 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 KCNK15Q9H427 330 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 C4orf47A7E2U8 309 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 NKX2-2O95096 273 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 ABHD16AO95870 558 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 CD34P28906 385 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 BDKRB2P30411 391 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 CDKN2AP42771 156 aaKnown RBP12.91□□□□□ -0.34
SRP54-202ENST00000546080 S100A12P80511 92 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 ATXN7L3Q14CW9 347 aaPredicted RBP12.91□□□□□ -0.34
SRP54-202ENST00000546080 RAB11BQ15907 218 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 LPCAT3Q6P1A2 487 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 SLC39A5Q6ZMH5 540 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 ARMC10Q8N2F6 343 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 OR51A4Q8NGJ6 313 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 GPX8Q8TED1 209 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 ATG5Q9H1Y0 275 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 ZNF768Q9H5H4 540 aaKnown RBP12.91□□□□□ -0.34
SRP54-202ENST00000546080 KIR3DX1Q9H7L2 352 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 SFXN1Q9H9B4 322 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 BIN3Q9NQY0 253 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.91□□□□□ -0.34
SRP54-202ENST00000546080 LAMP5Q9UJQ1 280 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 ERVK-19Q9WJR5 959 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 NOP16Q9Y3C1 178 aaKnown RBP12.91□□□□□ -0.34
SRP54-202ENST00000546080 OR10H1Q9Y4A9 318 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 COLEC10Q9Y6Z7 277 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 SPACA6W5XKT8 324 aa12.91□□□□□ -0.34
SRP54-202ENST00000546080 GOLGA4Q13439 2230 aaKnown RBP12.91□□□□□ -0.34
SRP54-202ENST00000546080 A0A1B0GTI1 187 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 TMEM212A6NML5 194 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 OR4C45A6NMZ5 311 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 GRXCR1A8MXD5 290 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 F8W036 122 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 SLC25A12O75746 678 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 GPR75O95800 540 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 AMY2AP04746 511 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 DRD3P35462 400 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 PRPS1P60891 318 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 KCNAB1Q14722 419 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 FBXO42Q6P3S6 717 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 TMEM205Q6UW68 189 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 ACOT7LQ6ZUV0 252 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 ABHD13Q7L211 337 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 GRASPQ7Z6J2 395 aaPredicted RBP12.9□□□□□ -0.34
SRP54-202ENST00000546080 BIVMQ86UB2 503 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 TMEM52Q8NDY8 209 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 OR52R1Q8NGF1 315 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 OR2G2Q8NGZ5 317 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 TSEN15Q8WW01 171 aaKnown RBP12.9□□□□□ -0.34
SRP54-202ENST00000546080 ULBP3Q9BZM4 244 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 SLC19A3Q9BZV2 496 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 FAM117AQ9C073 453 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 FBXO4Q9UKT5 387 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 YBX2Q9Y2T7 364 aaKnown RBP12.9□□□□□ -0.34
SRP54-202ENST00000546080 HEBP2Q9Y5Z4 205 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 TP53BP1Q12888 1972 aaPredicted RBP12.9□□□□□ -0.34
SRP54-202ENST00000546080 A0A087WUJ7 227 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 LOC100289279A0A1B0GTE1 492 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 RNF222A6NCQ9 220 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 HIDE1A8MVS5 230 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 M0QYG6 137 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms