RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 KRT6CP48668 564 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 CCR4P51679 360 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 PRKAG1P54619 331 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 ATP12AP54707 1039 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 ARL4CP56559 192 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 OR2B6P58173 313 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 KRTAP10-3P60369 221 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 H3F3AP84243 136 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 GALK2Q01415 458 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 ACSM2AQ08AH3 577 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF763Q0D2J5 394 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 NPRL3Q12980 569 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 DCTN2Q13561 401 aaKnown RBP3.44□□□□□ -1.86
SNHG1-220ENST00000544550 SLC17A1Q14916 467 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 TOMM34Q15785 309 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-220ENST00000544550 MOGQ16653 247 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 KCTD19Q17RG1 926 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-220ENST00000544550 TRMT5Q32P41 509 aaKnown RBP3.44□□□□□ -1.86
SNHG1-220ENST00000544550 TMEM95Q3KNT9 176 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 NRN1LQ496H8 165 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 KLHL26Q53HC5 615 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 KLF17Q5JT82 389 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-220ENST00000544550 ACSM2BQ68CK6 577 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 RGS7BPQ6MZT1 257 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-220ENST00000544550 TTC27Q6P3X3 843 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 MZT2AQ6P582 158 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 PAQR6Q6TCH4 344 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 BTNL3Q6UXE8 466 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 LRIG3Q6UXM1 1119 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF620Q6ZNG0 422 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 GDPGP1Q6ZNW5 385 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 Q6ZTK2 550 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 SZRD1Q7Z422 152 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 CCDC28AQ8IWP9 274 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 SLC15A3Q8IY34 581 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 SPICQ8N5J4 248 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 NOA1Q8NC60 698 aaKnown RBP3.44□□□□□ -1.86
SNHG1-220ENST00000544550 OR4F6Q8NGB9 312 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 RFWD2Q8NHY2 731 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 C16orf78Q8WTQ4 265 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 DCAKDQ8WVC6 231 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 SSMEM1Q8WWF3 244 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 BCL2L2Q92843 193 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-220ENST00000544550 DDIT4LQ96D03 193 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 ELMOD3Q96FG2 381 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 CHMP6Q96FZ7 201 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 AURKBQ96GD4 344 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-220ENST00000544550 AMDHD1Q96NU7 426 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 STACQ99469 402 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 KLHDC3Q9BQ90 382 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 GATA5Q9BWX5 397 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-220ENST00000544550 PCDHAC1Q9H158 963 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 SAP30LQ9HAJ7 183 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 HINT3Q9NQE9 182 aaKnown RBP3.44□□□□□ -1.86
SNHG1-220ENST00000544550 DUSP22Q9NRW4 184 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 DECR2Q9NUI1 292 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 ACER3Q9NUN7 267 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 GIN1Q9NXP7 522 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 SLCO1C1Q9NYB5 712 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 UBAP1Q9NZ09 502 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 TMEM181Q9P2C4 612 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 OR5V1Q9UGF6 321 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 CHRNA9Q9UGM1 479 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 FBXL3Q9UKT7 428 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 GUCA1BQ9UMX6 200 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 PCDHGB4Q9UN71 923 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 MYRFQ9Y2G1 1151 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 DTNAQ9Y4J8 743 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 INSIG2Q9Y5U4 225 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 BIRC6Q9NR09 4857 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 VWFP04275 2813 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 MED12Q93074 2177 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 CENPVL1A0A0U1RR11 272 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 ZAR1LA6NP61 321 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 A8MXK9 166 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 TRIM49D1C9J1S8 452 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 POC1B-GALNT4F8VUJ3 575 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 RPL36A-HNRNPH2H7BZ11 118 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 NR5A2O00482 541 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF208O43345 1280 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 RGS10O43665 173 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 URI1O94763 535 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF432O94892 652 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 VAMP5O95183 116 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 PPP1R3DO95685 299 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 KRT16P08779 473 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 ANXA4P09525 319 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-220ENST00000544550 ACP2P11117 423 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 IVDP26440 423 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 MAGEB1P43366 347 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 ASMTP46597 345 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 CAPZA2P47755 286 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 SEC24CP53992 1094 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 TUBA1BP68363 451 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 TUBA4AP68366 448 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 RAE1P78406 368 aaKnown RBP3.43□□□□□ -1.86
SNHG1-220ENST00000544550 CCL8P80075 99 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 C2orf80Q0P641 193 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 BST1Q10588 318 aa3.43□□□□□ -1.86
SNHG1-220ENST00000544550 DLG1Q12959 904 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms