RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 TRIM64BA6NI03 449 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 VSTM5A8MXK1 200 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 MCIDASD6RGH6 385 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 H7C417 338 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 PDE5AO76074 875 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 IGHV4-39P01824 125 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 TSPAN19P0C672 248 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 GSG1Q2KHT4 349 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 ANKDD1AQ495B1 522 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 PIGWQ7Z7B1 504 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 RNF113BQ8IZP6 322 aaKnown RBP20.23■□□□□ 0.83
CHFR-222ENST00000544093 BPIFA2Q96DR5 249 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 HSH2DQ96JZ2 352 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 INIPQ9NRY2 104 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 CA10Q9NS85 328 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 NDE1Q9NXR1 346 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 ADA2Q9NZK5 511 aa20.23■□□□□ 0.83
CHFR-222ENST00000544093 GMPR2Q9P2T1 348 aaKnown RBP20.23■□□□□ 0.83
CHFR-222ENST00000544093 ZFHX3Q15911 3703 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 UBL3O95164 117 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 PGA4P0DJD7 388 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 PGA3P0DJD8 388 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 NR2C1P13056 603 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 IDH3GP51553 393 aaPredicted RBP20.22■□□□□ 0.83
CHFR-222ENST00000544093 CLRN1P58418 232 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 RAB35Q15286 201 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 TAF11Q15544 211 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 CLEC9AQ6UXN8 241 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 DPPA2Q7Z7J5 298 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 MDP1Q86V88 176 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 NUP37Q8NFH4 326 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 GSX1Q9H4S2 264 aaPredicted RBP20.22■□□□□ 0.83
CHFR-222ENST00000544093 ANKRD19PQ9H560 264 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 B3GNT2Q9NY97 397 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 SAMD4AQ9UPU9 718 aaKnown RBP20.22■□□□□ 0.83
CHFR-222ENST00000544093 HIF3AQ9Y2N7 669 aa20.22■□□□□ 0.83
CHFR-222ENST00000544093 MGRN1O60291 552 aa20.21■□□□□ 0.83
CHFR-222ENST00000544093 SEC14L2O76054 403 aa20.21■□□□□ 0.83
CHFR-222ENST00000544093 FARS2O95363 451 aaKnown RBP20.21■□□□□ 0.83
CHFR-222ENST00000544093 IFI30P13284 250 aa20.21■□□□□ 0.83
CHFR-222ENST00000544093 B4GALT1P15291 398 aa20.21■□□□□ 0.83
CHFR-222ENST00000544093 GYS2P54840 703 aa20.21■□□□□ 0.83
CHFR-222ENST00000544093 NPRL3Q12980 569 aa20.21■□□□□ 0.83
CHFR-222ENST00000544093 MELKQ14680 651 aa20.21■□□□□ 0.83
CHFR-222ENST00000544093 NRN1LQ496H8 165 aa20.21■□□□□ 0.83
CHFR-222ENST00000544093 CDK20Q8IZL9 346 aa20.21■□□□□ 0.83
CHFR-222ENST00000544093 ACOT11Q8WXI4 607 aaPredicted RBP20.21■□□□□ 0.83
CHFR-222ENST00000544093 SEPHS2Q99611 448 aa20.21■□□□□ 0.83
CHFR-222ENST00000544093 NSD1Q96L73 2696 aaPredicted RBP20.21■□□□□ 0.83
CHFR-222ENST00000544093 DYNC1I1O14576 645 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 DHHO43323 396 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 F13BP05160 661 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 HEXAP06865 529 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 OR8G3PP0DMU2 310 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 CD79AP11912 226 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 SERPINF1P36955 418 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 AQP2P41181 271 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 NUDT6P53370 316 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 DSCR9P59020 149 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 SNRPD2P62316 118 aaKnown RBP20.2■□□□□ 0.82
CHFR-222ENST00000544093 TNK1Q13470 666 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 HIST3H3Q16695 136 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 GLYATQ6IB77 296 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 WDFY1Q8IWB7 410 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 PGAM4Q8N0Y7 254 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 CIARTQ8N365 385 aaPredicted RBP20.2■□□□□ 0.82
CHFR-222ENST00000544093 ANKS4BQ8N8V4 417 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 ASB10Q8WXI3 467 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 ZNF442Q9H7R0 627 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 MAN2C1Q9NTJ4 1040 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 TAGLN3Q9UI15 199 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 FAM32AQ9Y421 112 aaKnown RBP20.2■□□□□ 0.82
CHFR-222ENST00000544093 SNX13Q9Y5W8 968 aa20.2■□□□□ 0.82
CHFR-222ENST00000544093 ZANQ9Y493 2812 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 ZNF503-AS2A6NEH8 195 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 RAB36O95755 333 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 HLA-HP01893 362 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 SAGP10523 405 aaPredicted RBP20.19■□□□□ 0.82
CHFR-222ENST00000544093 ACVR1BP36896 505 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 YAP1P46937 504 aaKnown RBP20.19■□□□□ 0.82
CHFR-222ENST00000544093 SLC9A3P48764 834 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 ZNF84P51523 738 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 MNAT1P51948 309 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 PRKCDQ05655 676 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 SPATS1Q496A3 300 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 ALG10Q5BKT4 473 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 SAMD4BQ5PRF9 694 aaKnown RBP20.19■□□□□ 0.82
CHFR-222ENST00000544093 LRFN4Q6PJG9 635 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 ZNF730Q6ZMV8 503 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 DNM1P46Q6ZS02 220 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 RRM2BQ7LG56 351 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 NRMQ8IXM6 262 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 SLC22A24Q8N4F4 322 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 NOXO1Q8NFA2 376 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 FNDC8Q8TC99 324 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 MRPL13Q9BYD1 178 aaKnown RBP20.19■□□□□ 0.82
CHFR-222ENST00000544093 TXNIPQ9H3M7 391 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 GORASP2Q9H8Y8 452 aa20.19■□□□□ 0.82
CHFR-222ENST00000544093 DCAF13Q9NV06 445 aaKnown RBP20.19■□□□□ 0.82
CHFR-222ENST00000544093 TMEM38BQ9NVV0 291 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms