RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 BPIFB2Q8N4F0 458 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 CISD2Q8N5K1 135 aaKnown RBP8.14□□□□□ -1.11
VPS13D-212ENST00000543766 CLDN22Q8N7P3 220 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 SLC44A5Q8NCS7 719 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 HPSE2Q8WWQ2 592 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 COQ8BQ96D53 544 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 SLC6A18Q96N87 628 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 MS4A4EQ96PG1 132 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 CDK15Q96Q40 435 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 CDT1Q9H211 546 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 PLEKHA2Q9HB19 425 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 C3orf14Q9HBI5 128 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 SLC6A20Q9NP91 592 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 ANKRD20A5PA0PJZ0 165 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 APOC4-APOC2K7ER74 178 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 SLC16A5O15375 505 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 OR2J3O76001 311 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 ITGBL1O95965 494 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-212ENST00000543766 APOC2P02655 101 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 SERPINE2P07093 398 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 HSD17B1P14061 328 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 KDELR1P24390 212 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 OR4D2P58180 307 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 RPL32P62910 135 aaKnown RBP8.14□□□□□ -1.11
VPS13D-212ENST00000543766 TGIF1Q15583 401 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 LTC4SQ16873 150 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 ASCL5Q7RTU5 278 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 TMEM156Q8N614 296 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 RELL2Q8NC24 303 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-212ENST00000543766 ORAI1Q96D31 301 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 TEX37Q96LM6 180 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 CD180Q99467 661 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 SLC30A2Q9BRI3 323 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 TMEM43Q9BTV4 400 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 THSD1Q9NS62 852 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 PILRBQ9UKJ0 227 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 hCG_38984A0A1B0GV85 526 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 M0QYT0 321 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 HSD17B6O14756 317 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 TUSC2O75896 110 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 TOX4O94842 621 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 ACRP10323 421 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 FASP25445 335 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 DUSP3P51452 185 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF84P51523 738 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 RPS16P62249 146 aaKnown RBP8.14□□□□□ -1.11
VPS13D-212ENST00000543766 SNRPFP62306 86 aaKnown RBP8.14□□□□□ -1.11
VPS13D-212ENST00000543766 SMAD3P84022 425 aaKnown RBP8.14□□□□□ -1.11
VPS13D-212ENST00000543766 TIMM50Q3ZCQ8 353 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 GLYATQ6IB77 296 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 HSD17B13Q7Z5P4 300 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-212ENST00000543766 OR2T35Q8NGX2 323 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 OR10A6Q8NH74 314 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 SMOC2Q9H3U7 446 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 EXOSC4Q9NPD3 245 aaKnown RBP8.14□□□□□ -1.11
VPS13D-212ENST00000543766 V9GYS6 101 aa8.14□□□□□ -1.11
VPS13D-212ENST00000543766 DHRS12A0PJE2 317 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 B4DXG7 233 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF814B7Z6K7 855 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 INMT-MINDY4F8WBC2 141 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 F8WDY8 70 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 TGFBR3LH3BV60 316 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 FGF2P09038 288 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 SBK3P0C264 359 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 AKR1C4P17516 323 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 TAS2R38P59533 333 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 UBE2V1Q13404 147 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 PDCD1Q15116 288 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 PRSS53Q2L4Q9 553 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 C6orf141Q5SZD1 244 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 DNM1P34Q6PK57 102 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 GLCCI1Q86VQ1 547 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 UEVLDQ8IX04 471 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 OR10X1Q8NGY0 326 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 CFHR4Q92496 578 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 RAB8BQ92930 207 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 FCRL5Q96RD9 977 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 NKX3-1Q99801 234 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-212ENST00000543766 FDXACB1Q9BRP7 624 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-212ENST00000543766 SIRPDQ9H106 197 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 OXSMQ9NWU1 459 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 TRAPPC4Q9Y296 219 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 GLYATL1P3A0A0U1RQE8 302 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 SAP18O00422 153 aaKnown RBP8.13□□□□□ -1.11
VPS13D-212ENST00000543766 TSPAN19P0C672 248 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 CDX1P47902 265 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-212ENST00000543766 BTG2P78543 158 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 SHBQ15464 509 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 GCSAMLQ5JQS6 135 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF697Q5TEC3 545 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 BLOC1S3Q6QNY0 202 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 CSNK1A1LQ8N752 337 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 MCHR2Q969V1 340 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 ISOC2Q96AB3 205 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 ESAMQ96AP7 390 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 MBOAT4Q96T53 435 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 PHF7Q9BWX1 381 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-212ENST00000543766 GATA5Q9BWX5 397 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-212ENST00000543766 SLC45A2Q9UMX9 530 aa8.13□□□□□ -1.11
VPS13D-212ENST00000543766 PSG11Q9UQ72 335 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms