RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	C8orf4	Q9NR00	106 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	GLTP	Q9NZD2	209 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	PRSS50	Q9UI38	385 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	TMEFF2	Q9UIK5	374 aa	Predicted RBP	8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	GTF3C1	Q12789	2109 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	NPIPB13	A6NJU9	1138 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	RIIAD1	A6NNX1	92 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	NPIPB4	C9JG80	1138 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	ZNF587B	E7ETH6	402 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545		H7C1C5	153 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	ARPC3	O15145	178 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	ZNF432	O94892	652 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	TXNDC12	O95881	172 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	REN	P00797	406 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	CGA	P01215	116 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	QDPR	P09417	244 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	NR2C1	P13056	603 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	HIST1H1C	P16403	213 aa	Known RBP	8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	EDNRA	P25101	427 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	POLR2I	P36954	125 aa	Known RBP	8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	CENPA	P49450	140 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	LCN6	P62502	163 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	LGALS3BP	Q08380	585 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	NPRL3	Q12980	569 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	ITGAD	Q13349	1161 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	PTGES3	Q15185	160 aa	Known RBP	8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	SNAPC1	Q16533	368 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	OGFRL1	Q5TC84	451 aa	Predicted RBP	8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	C9orf135	Q5VTT2	229 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	FBXW9	Q5XUX1	488 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	FBXW10	Q5XX13	1052 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	ACSM5	Q6NUN0	579 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	LEG1	Q6P5S2	330 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	BEND4	Q6ZU67	534 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	FAM122B	Q7Z309	247 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	LNX2	Q8N448	690 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	FAM26E	Q8N5C1	309 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	PACRGL	Q8N7B6	248 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	RELL2	Q8NC24	303 aa	Predicted RBP	8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	OR4Q3	Q8NH05	313 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	ZNF519	Q8TB69	540 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	NSMAF	Q92636	917 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	HDAC2	Q92769	488 aa	Known RBP	8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	SLC38A2	Q96QD8	506 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	NMNAT3	Q96T66	252 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	ALG12	Q9BV10	488 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	RBM24	Q9BX46	236 aa	Known RBP	8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	PRRG3	Q9BZD7	231 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	ULBP2	Q9BZM5	246 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	TOR3A	Q9H497	397 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	SLC7A10	Q9NS82	523 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	ASB6	Q9NWX5	421 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	SMPD3	Q9NY59	655 aa	Predicted RBP	8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	TVP23B	Q9NYZ1	205 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	KLHL21	Q9UJP4	597 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	CFAP46	Q8IYW2	2715 aa		8.98	□□□□□ -0.97
CPSF7-221	ENST00000543545	CIB4	A0PJX0	185 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	PRSS37	A4D1T9	235 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	NKX2-6	A6NCS4	301 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545		A8MXE2	369 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	BHLHE40	O14503	412 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	CLDN14	O95500	239 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	SNAP29	O95721	258 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	PGA4	P0DJD7	388 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	PGA3	P0DJD8	388 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	ZNF3	P17036	446 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	AGA	P20933	346 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	EPHA2	P29317	976 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	GRK5	P34947	590 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	CDKN2A	P42771	156 aa	Known RBP	8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	GUCA1A	P43080	201 aa	Predicted RBP	8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	PTDSS1	P48651	473 aa	Known RBP	8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	ASCL1	P50553	236 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	CDK5	Q00535	292 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	ROR2	Q01974	943 aa	Known RBP	8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	MEST	Q5EB52	335 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	ZNF474	Q6S9Z5	364 aa	Predicted RBP	8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	ADCK1	Q86TW2	530 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	WDFY1	Q8IWB7	410 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	TMEM123	Q8N131	208 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	ZNF555	Q8NEP9	628 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	SDR9C7	Q8NEX9	313 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	NOXO1	Q8NFA2	376 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	NRG4	Q8WWG1	115 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	CYGB	Q8WWM9	190 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	ITLN2	Q8WWU7	325 aa	Predicted RBP	8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	TMEM54	Q969K7	222 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	MCHR2	Q969V1	340 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	LRR1	Q96L50	414 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	ALKBH3	Q96Q83	286 aa	Predicted RBP	8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	GABARAPL3	Q9BY60	117 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	LINC00470	Q9BZP3	86 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	SLC25A19	Q9HC21	320 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	CRLF2	Q9HC73	371 aa		8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	SPEN	Q96T58	3664 aa	Known RBP	8.97	□□□□□ -0.97
CPSF7-221	ENST00000543545	MYO7B	Q6PIF6	2116 aa		8.96	□□□□□ -0.97
CPSF7-221	ENST00000543545	SLC22A23	A1A5C7	686 aa		8.96	□□□□□ -0.98
CPSF7-221	ENST00000543545	CENPBD1	B2RD01	187 aa		8.96	□□□□□ -0.98

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms