RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 MS4A18H0YCH9 400 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 XKRYO14609 159 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 AKAP8O43823 692 aaKnown RBP8.38□□□□□ -1.07
GNE-206ENST00000543356 ZIC3O60481 467 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 SERPINI2O75830 405 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 MRPL3P09001 348 aaKnown RBP8.38□□□□□ -1.07
GNE-206ENST00000543356 OR2T7P0C7T2 308 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 M6PRP20645 277 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 CNR1P21554 472 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 AHCYP23526 432 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 ACVR1BP36896 505 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 DNASE1L1P49184 302 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 DAP3P51398 398 aaKnown RBP8.38□□□□□ -1.07
GNE-206ENST00000543356 SOX8P57073 446 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 VBP1P61758 197 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 NCS1P62166 190 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 TLE3Q04726 772 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 MS4A18Q3C1V0 323 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 GDPGP1Q6ZNW5 385 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 PHC2Q8IXK0 858 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 OR5M1Q8NGP8 315 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 OR2T4Q8NH00 348 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 OR2T27Q8NH04 317 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 NDNFQ8TB73 568 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 THAP4Q8WY91 577 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 TM9SF4Q92544 642 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 UFD1Q92890 307 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 UTP23Q9BRU9 249 aaKnown RBP8.38□□□□□ -1.07
GNE-206ENST00000543356 OR51E2Q9H255 320 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 LRFN1Q9P244 771 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 ATPIF1Q9UII2 106 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 TRAPPC4Q9Y296 219 aa8.38□□□□□ -1.07
GNE-206ENST00000543356 MRPS18CQ9Y3D5 142 aaKnown RBP8.38□□□□□ -1.07
GNE-206ENST00000543356 A0A0B4J203 849 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 A6NIZ1 184 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 FAM25EA8MYX2 175 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 ERVH48-1M5A8F1 160 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 PLGP00747 810 aaPredicted RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 ZNF182P17025 639 aaPredicted RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 CD96P40200 585 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 RRADP55042 308 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 RAP1BP61224 184 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 LSM3P62310 102 aaKnown RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 RAP1AP62834 184 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 FOXK1P85037 733 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 IFITM3Q01628 133 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 OC90Q02509 493 aaPredicted RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 ZNF85Q03923 595 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 RTP5Q14D33 572 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 TGIF1Q15583 401 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 EEF1A1P5Q5VTE0 462 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 FIP1L1Q6UN15 594 aaKnown RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 PXKQ7Z7A4 578 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 SLC35F2Q8IXU6 374 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 ZNF248Q8NDW4 579 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 KBTBD8Q8NFY9 601 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 SPRYD4Q8WW59 207 aaPredicted RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 ZNRF4Q8WWF5 429 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 ASB10Q8WXI3 467 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 JSRP1Q96MG2 331 aaPredicted RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 UBL7Q96S82 380 aaPredicted RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 TIMP4Q99727 224 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 PIGQQ9BRB3 760 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 ALG12Q9BV10 488 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 STUB1Q9UNE7 303 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 NOSIPQ9Y314 301 aaKnown RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 EML6Q6ZMW3 1958 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 OR2M5A3KFT3 312 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 PRSS37A4D1T9 235 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 SEC14L5O43304 696 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 ARHGEF9O43307 516 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 NEURL1O76050 574 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 PMS2P2O95744 297 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 TFP02787 698 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 PSMA1P25786 263 aaKnown RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 SHC1P29353 583 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 PTGS2P35354 604 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 HSF2Q03933 536 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 C19orf57Q0VDD7 668 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 DBPQ10586 325 aaPredicted RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 LIPKQ5VXJ0 399 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 RAET1LQ5VY80 246 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 GHDCQ8N2G8 530 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 OR51L1Q8NGJ5 315 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 OR6K6Q8NGW6 343 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 DYNC2LI1Q8TCX1 351 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 MIB2Q96AX9 1013 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 C5orf34Q96MH7 638 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 OR5B2Q96R09 309 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 BOKQ9UMX3 212 aaPredicted RBP8.37□□□□□ -1.07
GNE-206ENST00000543356 UGT2A1Q9Y4X1 527 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 FKBP7Q9Y680 259 aa8.37□□□□□ -1.07
GNE-206ENST00000543356 ARPC4-TTLL3A0A0A6YYG9 625 aa8.36□□□□□ -1.07
GNE-206ENST00000543356 A0A1W2PQL4 384 aaPredicted RBP8.36□□□□□ -1.07
GNE-206ENST00000543356 NPIPA5E9PKD4 350 aa8.36□□□□□ -1.07
GNE-206ENST00000543356 H7C1C5 153 aa8.36□□□□□ -1.07
GNE-206ENST00000543356 MT-ND5P03915 603 aa8.36□□□□□ -1.07
GNE-206ENST00000543356 PYCR1P32322 319 aa8.36□□□□□ -1.07
GNE-206ENST00000543356 CENPAP49450 140 aa8.36□□□□□ -1.07
GNE-206ENST00000543356 P2RY4P51582 365 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms