RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 C6orf120Q7Z4R8 191 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 MARCH3Q86UD3 253 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 CROCCP3Q8IVE0 287 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 FADS6Q8N9I5 356 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 OR2M3Q8NG83 312 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 RNF138Q8WVD3 245 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 CDS1Q92903 461 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 SAT2Q96F10 170 aaPredicted RBP4.8□□□□□ -1.64
CPSF7-220ENST00000541963 GIMAP5Q96F15 307 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 C16orf58Q96GQ5 468 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 SLC35G5Q96KT7 338 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 ZFP3Q96NJ6 502 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 RABEP2Q9H5N1 569 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 RMND5AQ9H871 391 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 SAR1AQ9NR31 198 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 CISD1Q9NZ45 108 aaKnown RBP4.8□□□□□ -1.64
CPSF7-220ENST00000541963 MED11Q9P086 117 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 ZNF629Q9UEG4 869 aaPredicted RBP4.8□□□□□ -1.64
CPSF7-220ENST00000541963 BTNL2Q9UIR0 455 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 SLC6A5Q9Y345 797 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 AP4B1Q9Y6B7 739 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 MYO18BQ8IUG5 2567 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 POLEQ07864 2286 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 RELNP78509 3460 aa4.8□□□□□ -1.64
CPSF7-220ENST00000541963 GCN1Q92616 2671 aaKnown RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 PHF3Q92576 2039 aaKnown RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 EXPH5Q8NEV8 1989 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 IGLV3-32A0A0A0MS00 114 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 GOLGA8QA0A0J9YX86 632 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 RNF103-CHMP3A0A140T963 221 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 GOLGA8OA6NCC3 632 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 GOLGA8NF8WBI6 632 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 SOCS2O14508 198 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 SDHDO14521 159 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 UBDO15205 165 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 HCRTR2O43614 444 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 ZIC3O60481 467 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 STX11O75558 287 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 SLC22A3O75751 556 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 KRT75O95678 551 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 OXSR1O95747 527 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 SSTR2P30874 369 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 CEACAM8P31997 349 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 EIF1P41567 113 aaKnown RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 RAD52P43351 418 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 ZNF41P51814 821 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 ATP12AP54707 1039 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 P2RX3P56373 397 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 STX1BP61266 288 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 NCALDP61601 193 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 SSBP2P81877 361 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 HPCAP84074 193 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 SGCBQ16585 318 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 FAM174BQ3ZCQ3 159 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 ACSF3Q4G176 576 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 DCST2Q5T1A1 773 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 ASPHD1Q5U4P2 390 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 RAET1LQ5VY80 246 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 HIST2H2BCQ6DN03 193 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 SIGIRRQ6IA17 410 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 RTL6Q6ICC9 239 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 OR2A2Q6IF42 318 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 ZNF621Q6ZSS3 439 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 C16orf62Q7Z3J2 963 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 NOXA1Q86UR1 476 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 HAPLN4Q86UW8 402 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 CCDC71Q8IV32 467 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 MARVELD2Q8N4S9 558 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 OR4C3Q8NH37 302 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 FBXO30Q8TB52 745 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 C17orf50Q8WW18 174 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 OIT3Q8WWZ8 545 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 OR7D2Q96RA2 312 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 OR52E6Q96RD3 313 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 PANX1Q96RD7 426 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 FAM110AQ9BQ89 295 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 UCK2Q9BZX2 261 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 WDR55Q9H6Y2 383 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 FGFR1OP2Q9NVK5 253 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 AIG1Q9NVV5 245 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 PAQR5Q9NXK6 330 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 MARCOQ9UEW3 520 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 RPS6KA6Q9UK32 745 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 FBXL2Q9UKC9 423 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 BLOC1S6Q9UL45 172 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 RPH3AQ9Y2J0 694 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 FAM215AQ9Y5M1 114 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 HELZ2Q9BYK8 2649 aaKnown RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 NBASA2RRP1 2371 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 UBR5O95071 2799 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-220ENST00000541963 DOPEY2Q9Y3R5 2298 aa4.79□□□□□ -1.64
CPSF7-220ENST00000541963 FREM3P0C091 2139 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 RP1L1Q8IWN7 2480 aaPredicted RBP4.78□□□□□ -1.64
CPSF7-220ENST00000541963 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 NKX2-6A6NCS4 301 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 GJE1A6NN92 205 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 RFXANKO14593 260 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 ANKRD28O15084 1053 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 ZNF264O43296 627 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 EIF4E2O60573 245 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms