RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 RAB36O95755 333 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 ADRA2CP18825 462 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 BIDP55957 195 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 RGS8P57771 180 aaPredicted RBP13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 CDK6Q00534 326 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 MELKQ14680 651 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 NPTX1Q15818 432 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 GKAP1Q5VSY0 366 aaPredicted RBP13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 FAM91A1Q658Y4 838 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 LRFN4Q6PJG9 635 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 C5orf46Q6UWT4 87 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 NET1Q7Z628 596 aaPredicted RBP13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 OR4D11Q8NGI4 311 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 TMEM54Q969K7 222 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 SLC47A1Q96FL8 570 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 SH3GL3Q99963 347 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 MS4A5Q9H3V2 200 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 ESM1Q9NQ30 184 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 TESQ9UGI8 421 aaKnown RBP13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 CORINQ9Y5Q5 1042 aa13.21□□□□□ -0.29
CLSTN3-213ENST00000541953 A0A1W2PPW3 197 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 DEAF1O75398 565 aaPredicted RBP13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 TFP02787 698 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 AHCYP23526 432 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 CSNK1A1P48729 337 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 ACTG1P63261 375 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 CCL8P80075 99 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 MVKQ03426 396 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 REEP3Q6NUK4 255 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 FAHD2BQ6P2I3 314 aaPredicted RBP13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 ZNF771Q7L3S4 317 aaPredicted RBP13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 PXKQ7Z7A4 578 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 RBM45Q8IUH3 476 aaKnown RBP13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 C10orf53Q8N6V4 93 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 LRRC17Q8N6Y2 441 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 GOLGA6L1Q8N7Z2 621 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 SMYD1Q8NB12 490 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 OR6S1Q8NH40 331 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 FAHD2AQ96GK7 314 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 EBF4Q9BQW3 602 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 ASPNQ9BXN1 380 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 TMPRSS13Q9BYE2 586 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 TAAR3PQ9P1P4 343 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 NOX1Q9Y5S8 564 aa13.2□□□□□ -0.3
CLSTN3-213ENST00000541953 WNK2Q9Y3S1 2297 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 UBL3O95164 117 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 OPN1SWP03999 348 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 SERPINA5P05154 406 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 ADORA3P0DMS8 318 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 EPHA1P21709 976 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 COMPP49747 757 aaPredicted RBP13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 HILS1P60008 231 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 GALK2Q01415 458 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 GLO1Q04760 184 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 SCARB2Q14108 478 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 EPGNQ6UW88 154 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 LINC00114Q6XXX2 140 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 PEG10Q86TG7 708 aaKnown RBP13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 SLC22A24Q8N4F4 322 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 GPR32P1Q8NGA4 272 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 OR5J2Q8NH18 312 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 OR51F2Q8NH61 342 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 TMEM43Q9BTV4 400 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 B3GAT2Q9NPZ5 323 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 TMEM38BQ9NVV0 291 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 TAS2R5Q9NYW4 299 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 SLC7A8Q9UHI5 535 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 GRIP1Q9Y3R0 1128 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 USH1CQ9Y6N9 552 aa13.19□□□□□ -0.3
CLSTN3-213ENST00000541953 IGLV3-9A0A075B6K5 115 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 A0A0A6YYJ9 748 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 TMEM89A2RUT3 159 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 ZNF726A6NNF4 738 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 C17orf100A8MU93 164 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 SLCO1B7G3V0H7 640 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 PNPP00491 289 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 PCMT1P22061 227 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 ARFIP2P53365 341 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 TMEM33P57088 247 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 NCALDP61601 193 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 RPS23P62266 143 aaKnown RBP13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 SELPLGQ14242 412 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 NKPD1Q17RQ9 610 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 RGS7BPQ6MZT1 257 aaPredicted RBP13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 SHQ1Q6PI26 577 aaKnown RBP13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 BLOC1S3Q6QNY0 202 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 SLC35D2Q76EJ3 337 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 PTOV1Q86YD1 416 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 SLC30A7Q8NEW0 376 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 ZFAND2BQ8WV99 257 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 TRIM44Q96DX7 344 aaPredicted RBP13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 SPDL1Q96EA4 605 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 EPYCQ99645 322 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 ARHGDIGQ99819 225 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 SLC6A7Q99884 636 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 CPPED1Q9BRF8 314 aaPredicted RBP13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 RAD21L1Q9H4I0 556 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 ZNF385DQ9H6B1 395 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 ZNF665Q9H7R5 613 aa13.18□□□□□ -0.3
CLSTN3-213ENST00000541953 TMEM27Q9HBJ8 222 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms