RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 UBTFL1P0CB47 393 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-217ENST00000541578 STAG3L3P0CL85 134 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 COX5AP20674 150 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 IL12AP29459 219 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 GCKP35557 465 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 ETV5P41161 510 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 XCR1P46094 333 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 OR1D4P47884 311 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 RPL29P47914 159 aaKnown RBP3.33□□□□□ -1.88
SNHG1-217ENST00000541578 CDH6P55285 790 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 RPS15P62841 145 aaKnown RBP3.33□□□□□ -1.88
SNHG1-217ENST00000541578 CDK16Q00536 496 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 ARL6IP1Q15041 203 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 TIGITQ495A1 244 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 TMEM52BQ4KMG9 183 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 EIPR1Q53HC9 387 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 METTL11BQ5VVY1 283 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 FAM199XQ6PEV8 388 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-217ENST00000541578 PAQR6Q6TCH4 344 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 CXCL17Q6UXB2 119 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 CCBE1Q6UXH8 406 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-217ENST00000541578 ARCQ7LC44 396 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 BIVMQ86UB2 503 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 SLC25A42Q86VD7 318 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 SLC47A2Q86VL8 602 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 ABHD12Q8N2K0 398 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 BPIFCQ8NFQ6 507 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 ERMNQ8TAM6 284 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 ADAMTS16Q8TE57 1224 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.33□□□□□ -1.88
SNHG1-217ENST00000541578 CELF6Q96J87 481 aaKnown RBP3.33□□□□□ -1.88
SNHG1-217ENST00000541578 PLEKHA8Q96JA3 519 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 RNF2Q99496 336 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 CCDC28BQ9BUN5 200 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 NMUR2Q9GZQ4 415 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 ILKAPQ9H0C8 392 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-217ENST00000541578 PPA2Q9H2U2 334 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 MFSD1Q9H3U5 465 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 CLSTN2Q9H4D0 955 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 TMEM185BQ9H7F4 350 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 VCPKMTQ9H867 229 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 CHRAC1Q9NRG0 131 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF446Q9NWS9 450 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 MRPL22Q9NWU5 206 aaKnown RBP3.33□□□□□ -1.88
SNHG1-217ENST00000541578 CHMP5Q9NZZ3 219 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 PITPNC1Q9UKF7 332 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 NUP50Q9UKX7 468 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 CFAP45Q9UL16 551 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 PDE10AQ9Y233 779 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 RPL36Q9Y3U8 105 aaKnown RBP3.33□□□□□ -1.88
SNHG1-217ENST00000541578 RFX7Q2KHR2 1363 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 BAHCC1Q9P281 2608 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF292O60281 2723 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 PLXNA3P51805 1871 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 KMT2EQ8IZD2 1858 aa3.33□□□□□ -1.88
SNHG1-217ENST00000541578 MYH4Q9Y623 1939 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 MYO7AQ13402 2215 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 CACNA1HO95180 2353 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 TPRP12270 2363 aaKnown RBP3.32□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF840PA6NDX5 716 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 A8MX80 341 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 LOC730098B7Z3J9 87 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 SPECC1L-ADORA2AF8WAN1 911 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 GOLGA6L19H0YKK7 550 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 GPX5O75715 221 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 SLC2A10O95528 541 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 RENP00797 406 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 IGHG3P01860 377 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 MMP1P03956 469 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 P04436 131 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 VDAC1P21796 283 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 SLC2A5P22732 501 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 HTR1FP30939 366 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 CALCRP30988 508 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 NTSP30990 170 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 RRM2P31350 389 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 HNRNPH3P31942 346 aaKnown RBP3.32□□□□□ -1.88
SNHG1-217ENST00000541578 MAGEA1P43355 309 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 QARSP47897 775 aaKnown RBP3.32□□□□□ -1.88
SNHG1-217ENST00000541578 MNAT1P51948 309 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 CRYBB1P53674 252 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-217ENST00000541578 IST1P53990 364 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 PLP1P60201 277 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 KCNJ2P63252 427 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 PAX8Q06710 450 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 CD47Q08722 323 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 SYCP1Q15431 976 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 TGIF1Q15583 401 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 HADHQ16836 314 aaKnown RBP3.32□□□□□ -1.88
SNHG1-217ENST00000541578 VPS26BQ4G0F5 336 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 SLC22A6Q4U2R8 563 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 OR5M10Q6IEU7 315 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 DNM1P46Q6ZS02 220 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 PGAP1Q75T13 922 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 ASCL5Q7RTU5 278 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 TRIM69Q86WT6 500 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 PSTKQ8IV42 348 aaKnown RBP3.32□□□□□ -1.88
SNHG1-217ENST00000541578 COMMD1Q8N668 190 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 SDR9C7Q8NEX9 313 aa3.32□□□□□ -1.88
SNHG1-217ENST00000541578 OR4C5Q8NGB2 326 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms