RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 MRPL13Q9BYD1 178 aaKnown RBP16.53■□□□□ 0.24
VPS33A-205ENST00000541169 ULBP2Q9BZM5 246 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 CRLF2Q9HC73 371 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 GPR35Q9HC97 309 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 NRIP3Q9NQ35 241 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 CRIM1Q9NZV1 1036 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 AMDHD2Q9Y303 409 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 ZNF99A8MXY4 864 aaPredicted RBP16.52■□□□□ 0.24
VPS33A-205ENST00000541169 UPK3AO75631 287 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 LYZL6O75951 148 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 WNT11O96014 354 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 ITGA5P08648 1049 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 PGA4P0DJD7 388 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 PGA3P0DJD8 388 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 EDNRAP25101 427 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 CCKARP32238 428 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 CAMK2DQ13557 499 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 GABRA6Q16445 453 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 THEM4Q5T1C6 240 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 SHQ1Q6PI26 577 aaKnown RBP16.52■□□□□ 0.24
VPS33A-205ENST00000541169 KLHL24Q6TFL4 600 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 RASSF6Q6ZTQ3 369 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 ZNF627Q7L945 461 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.52■□□□□ 0.24
VPS33A-205ENST00000541169 ADCK1Q86TW2 530 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 HIPK1Q86Z02 1210 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 WFIKKN1Q96NZ8 548 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 ALKBH3Q96Q83 286 aaPredicted RBP16.52■□□□□ 0.24
VPS33A-205ENST00000541169 RBP7Q96R05 134 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 KATNB1Q9BVA0 655 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 IL20Q9NYY1 176 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 BAIAP2Q9UQB8 552 aa16.52■□□□□ 0.24
VPS33A-205ENST00000541169 ANKHD1Q8IWZ3 2542 aaKnown RBP16.52■□□□□ 0.23
VPS33A-205ENST00000541169 M0R3G1 203 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 ARPC3O15145 178 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 TIPRLO75663 272 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 GASTP01350 101 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 CRYGSP22914 178 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 SDHAP31040 664 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 ZNF133P52736 654 aaPredicted RBP16.51■□□□□ 0.23
VPS33A-205ENST00000541169 NR1H2P55055 460 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 KPNB1Q14974 876 aaKnown RBP16.51■□□□□ 0.23
VPS33A-205ENST00000541169 CARD17Q5XLA6 110 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 ZNF620Q6ZNG0 422 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 SVOPLQ8N434 492 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 NOXO1Q8NFA2 376 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 LINC01560Q8TB33 94 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 CENPNQ96H22 339 aaPredicted RBP16.51■□□□□ 0.23
VPS33A-205ENST00000541169 OR52D1Q9H346 318 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 PDP1Q9P0J1 537 aaPredicted RBP16.51■□□□□ 0.23
VPS33A-205ENST00000541169 CDH10Q9Y6N8 788 aa16.51■□□□□ 0.23
VPS33A-205ENST00000541169 TRMUO75648 421 aaKnown RBP16.5■□□□□ 0.23
VPS33A-205ENST00000541169 RAD51DO75771 328 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 TXNDC12O95881 172 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 COL8A1P27658 744 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 ACVR1BP36896 505 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 ZNF84P51523 738 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 CEACAM16Q2WEN9 425 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 FAM122BQ7Z309 247 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 DPPA2Q7Z7J5 298 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 LSRQ86X29 649 aaPredicted RBP16.5■□□□□ 0.23
VPS33A-205ENST00000541169 ZDHHC13Q8IUH4 622 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 OR9Q2Q8NGE9 314 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 OR1K1Q8NGR3 316 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 OR5K1Q8NHB7 308 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 ZNF519Q8TB69 540 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 ZNF570Q96NI8 536 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 KCNK17Q96T54 332 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 FEVQ99581 238 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 GPA33Q99795 319 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 DENND2DQ9H6A0 471 aaPredicted RBP16.5■□□□□ 0.23
VPS33A-205ENST00000541169 VNN3Q9NY84 501 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 ENOPH1Q9UHY7 261 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 ZNF346Q9UL40 294 aaKnown RBP16.5■□□□□ 0.23
VPS33A-205ENST00000541169 POFUT2Q9Y2G5 429 aa16.5■□□□□ 0.23
VPS33A-205ENST00000541169 A6NNC1 897 aa16.49■□□□□ 0.23
VPS33A-205ENST00000541169 GUCA1AP43080 201 aaPredicted RBP16.49■□□□□ 0.23
VPS33A-205ENST00000541169 ERFP50548 548 aa16.49■□□□□ 0.23
VPS33A-205ENST00000541169 ERVK-25P63136 954 aa16.49■□□□□ 0.23
VPS33A-205ENST00000541169 MELKQ14680 651 aa16.49■□□□□ 0.23
VPS33A-205ENST00000541169 PPA1Q15181 289 aa16.49■□□□□ 0.23
VPS33A-205ENST00000541169 BEX5Q5H9J7 111 aa16.49■□□□□ 0.23
VPS33A-205ENST00000541169 C10orf128Q5T292 105 aa16.49■□□□□ 0.23
VPS33A-205ENST00000541169 KLHL17Q6TDP4 642 aa16.49■□□□□ 0.23
VPS33A-205ENST00000541169 MEX3DQ86XN8 651 aaKnown RBP16.49■□□□□ 0.23
VPS33A-205ENST00000541169 TSPAN32Q96QS1 320 aa16.49■□□□□ 0.23
VPS33A-205ENST00000541169 SNX18Q96RF0 628 aa16.49■□□□□ 0.23
VPS33A-205ENST00000541169 ADGRG4Q8IZF6 3080 aa16.48■□□□□ 0.23
VPS33A-205ENST00000541169 ARPC4-TTLL3A0A0A6YYG9 625 aa16.48■□□□□ 0.23
VPS33A-205ENST00000541169 G3V2T6 193 aa16.48■□□□□ 0.23
VPS33A-205ENST00000541169 DHHO43323 396 aa16.48■□□□□ 0.23
VPS33A-205ENST00000541169 FARS2O95363 451 aaKnown RBP16.48■□□□□ 0.23
VPS33A-205ENST00000541169 QDPRP09417 244 aa16.48■□□□□ 0.23
VPS33A-205ENST00000541169 NPR2P20594 1047 aa16.48■□□□□ 0.23
VPS33A-205ENST00000541169 NOS3P29474 1203 aa16.48■□□□□ 0.23
VPS33A-205ENST00000541169 UBE2NP61088 152 aaKnown RBP16.48■□□□□ 0.23
VPS33A-205ENST00000541169 TOP3AQ13472 1001 aaPredicted RBP16.48■□□□□ 0.23
VPS33A-205ENST00000541169 TAB1Q15750 504 aa16.48■□□□□ 0.23
VPS33A-205ENST00000541169 ANKRD34AQ69YU3 496 aa16.48■□□□□ 0.23
VPS33A-205ENST00000541169 IGFN1Q86VF2 1251 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms