RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 ICMTO60725 284 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 CH25HO95992 272 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 MT-ND1P03886 318 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 MT-ND5P03915 603 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 OPN1SWP03999 348 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 ASAH2BP0C7U1 165 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 IFNGR1P15260 489 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 HNF1AP20823 631 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 PCMT1P22061 227 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 USF1P22415 310 aaPredicted RBP9.03□□□□□ -0.96
CDCA3-208ENST00000540683 CBLP22681 906 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 PCSK6P29122 969 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 BIDP55957 195 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 VLDLRP98155 873 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 SLC25A3Q00325 362 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 PLP2Q04941 152 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 NPRL3Q12980 569 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 CARD17Q5XLA6 110 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 CYB5R2Q6BCY4 276 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 PODNL1Q6PEZ8 512 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 Q71RC1 249 aaPredicted RBP9.03□□□□□ -0.96
CDCA3-208ENST00000540683 RRM2BQ7LG56 351 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 CYP4Z1Q86W10 505 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 CARM1Q86X55 608 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 TAMM41Q96BW9 452 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 SGTBQ96EQ0 304 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 MOGAT1Q96PD6 335 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 VRK1Q99986 396 aaPredicted RBP9.03□□□□□ -0.96
CDCA3-208ENST00000540683 EFCAB1Q9HAE3 211 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 KRCC1Q9NPI7 259 aaPredicted RBP9.03□□□□□ -0.96
CDCA3-208ENST00000540683 SAR1AQ9NR31 198 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 SLC7A8Q9UHI5 535 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 GDF2Q9UK05 429 aaPredicted RBP9.03□□□□□ -0.96
CDCA3-208ENST00000540683 ZANQ9Y493 2812 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 CSPG4Q6UVK1 2322 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 IQCMA0A1B0GVH7 501 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 INAFM1C9JVW0 142 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 C11orf98E9PRG8 122 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 BLOC1S5-TXNDC5H3BN57 136 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 SERPINI2O75830 405 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 IFNW1P05000 195 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 NR4A1P22736 598 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 KDELR2P33947 212 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 RAB1AP62820 205 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 SELENOWP63302 87 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 LSM11P83369 360 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDCA3-208ENST00000540683 ADIPOQQ15848 244 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 CHRFAM7AQ494W8 412 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 FAM209AQ5JX71 171 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 B3GLCTQ6Y288 498 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 DEF8Q6ZN54 512 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 MDP1Q86V88 176 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 CALHM3Q86XJ0 350 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 RNF113BQ8IZP6 322 aaKnown RBP9.02□□□□□ -0.97
CDCA3-208ENST00000540683 C10orf111Q8N326 155 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 GPR32P1Q8NGA4 272 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 C10orf105Q8TEF2 133 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 C10orf82Q8WW14 230 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 TMEM239Q8WW34 195 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 LIPHQ8WWY8 451 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 FNDC11Q9BVV2 318 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 SMURF2Q9HAU4 748 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 YAE1D1Q9NRH1 226 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 INIPQ9NRY2 104 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 MED29Q9NX70 200 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 RIMS3Q9UJD0 308 aa9.02□□□□□ -0.97
CDCA3-208ENST00000540683 IGHV2OR16-5A0A0B4J2B6 119 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 LOC100653049A0A140TA62 436 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 A6NIZ1 184 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 hCG_2039718K7EN88 272 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 M0R233 179 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 FBP2O00757 339 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 SYNGR3O43761 229 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 TPST2O60704 377 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 KRT34O76011 436 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 OR7A10O76100 309 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 HPRP00739 348 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 SERPINA5P05154 406 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 FUT1P19526 365 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 GLRXP35754 106 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 RAD52P43351 418 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 PTDSS1P48651 473 aaKnown RBP9.01□□□□□ -0.97
CDCA3-208ENST00000540683 SLC9A3P48764 834 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 GZMMP51124 257 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 RAP1BP61224 184 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 PCBD1P61457 104 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 RAP1AP62834 184 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 LGALS3BPQ08380 585 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 SCGB2A2Q13296 93 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 SNTB2Q13425 540 aaKnown RBP9.01□□□□□ -0.97
CDCA3-208ENST00000540683 SELPLGQ14242 412 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 TBC1D28Q2M2D7 210 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 TMEM249Q2WGJ8 235 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 IQCCQ4KMZ1 466 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 LRRC23Q53EV4 343 aaPredicted RBP9.01□□□□□ -0.97
CDCA3-208ENST00000540683 CYBRD1Q53TN4 286 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 RABL3Q5HYI8 236 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 VHLLQ6RSH7 139 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 HACD2Q6Y1H2 254 aa9.01□□□□□ -0.97
CDCA3-208ENST00000540683 LINGO2Q7L985 606 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms