RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 HIF3AQ9Y2N7 669 aa13.12□□□□□ -0.31
UBE3B-212ENST00000540230 ZFHX3Q15911 3703 aa13.12□□□□□ -0.31
UBE3B-212ENST00000540230 TRAV27A0A087WT01 109 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 CDC42EP2O14613 210 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 NDUFS7O75251 213 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 BCL10O95999 233 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 IGKV3-15P01624 115 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 IGLV1-44P01699 117 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 HLA-HP01893 362 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 T-ENOLP0DO92 83 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 CALCRP30988 508 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 IFNA8P32881 189 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 GPR4P46093 362 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 MYBPC1Q00872 1141 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 PRKCDQ05655 676 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 SHEQ5VZ18 495 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 LRFN4Q6PJG9 635 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 ZNF813Q6ZN06 617 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 ZNF627Q7L945 461 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 YTHDF3Q7Z739 585 aaKnown RBP13.11□□□□□ -0.31
UBE3B-212ENST00000540230 DTX2Q86UW9 622 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 MDP1Q86V88 176 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 IGFN1Q86VF2 1251 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 OR13C2Q8NGS9 318 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 SLC7A13Q8TCU3 470 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 GTPBP3Q969Y2 492 aaKnown RBP13.11□□□□□ -0.31
UBE3B-212ENST00000540230 CXorf56Q9H5V9 222 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 B3GAT2Q9NPZ5 323 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 INIPQ9NRY2 104 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 MAGEL2Q9UJ55 1249 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 ATP23Q9Y6H3 246 aa13.11□□□□□ -0.31
UBE3B-212ENST00000540230 B2RBV5 119 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 TRMUO75648 421 aaKnown RBP13.1□□□□□ -0.31
UBE3B-212ENST00000540230 HOXB1P14653 301 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-212ENST00000540230 PAX1P15863 534 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 CAPZA2P47755 286 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 IDH3GP51553 393 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-212ENST00000540230 ARMC4Q5T2S8 1044 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 C1QTNF12Q5T7M4 302 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 C11orf71Q6IPW1 123 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 PODNL1Q6PEZ8 512 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 ZNF730Q6ZMV8 503 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 RINLQ6ZS11 566 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 MBOAT2Q6ZWT7 520 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 LRRC75AQ8NAA5 344 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 SYT14Q8NB59 555 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 NOXO1Q8NFA2 376 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 OR51A7Q8NH64 312 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 FGFBP3Q8TAT2 258 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 PYURFQ96I23 114 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 NSL1Q96IY1 281 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 Q96MF0 132 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 DHRS9Q9BPW9 319 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 MRPL13Q9BYD1 178 aaKnown RBP13.1□□□□□ -0.31
UBE3B-212ENST00000540230 B3GNT2Q9NY97 397 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 POFUT2Q9Y2G5 429 aa13.1□□□□□ -0.31
UBE3B-212ENST00000540230 IGKV1D-43A0A0B4J1Z2 117 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 TRBV4-1A0A0J9YWV2 114 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 A0A1W2PRG6 482 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 MCIDASD6RGH6 385 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 GMNNO75496 209 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 IGHG1P01857 330 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 H1F0P07305 194 aaKnown RBP13.09□□□□□ -0.31
UBE3B-212ENST00000540230 QDPRP09417 244 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 PATE4P0C8F1 98 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 SAGP10523 405 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-212ENST00000540230 CBR1P16152 277 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 ZNF26P17031 533 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-212ENST00000540230 TTKP33981 857 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 ATP5J2P56134 94 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 NAAAQ02083 359 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 NPRL3Q12980 569 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 TOP3AQ13472 1001 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-212ENST00000540230 SEC23BQ15437 767 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 HIST3H3Q16695 136 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 ALG10Q5BKT4 473 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 CYP4Z1Q86W10 505 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 CIARTQ8N365 385 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-212ENST00000540230 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
UBE3B-212ENST00000540230 MCHR2Q969V1 340 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 NSMCE2Q96MF7 247 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 ZNF75AQ96N20 296 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 TNFRSF13CQ96RJ3 184 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 SEPHS2Q99611 448 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 MTORP42345 2549 aa13.09□□□□□ -0.31
UBE3B-212ENST00000540230 A0A1W2PRQ8 180 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 TRIM64A6NGJ6 449 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 TRIM64BA6NI03 449 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 EFCAB9A8MZ26 197 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 ARHGEF9O43307 516 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 DHHO43323 396 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 CD79AP11912 226 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 ACADSP16219 412 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 RHCEP18577 417 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 ATP6V1B2P21281 511 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 CLRN1P58418 232 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 FMODQ06828 376 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 PIGFQ07326 219 aa13.08□□□□□ -0.31
UBE3B-212ENST00000540230 DGCR6Q14129 220 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms