RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 ANKRD16Q6P6B7 361 aa19.36■□□□□ 0.69
TRIM65-202ENST00000540128 LRFN4Q6PJG9 635 aa19.36■□□□□ 0.69
TRIM65-202ENST00000540128 ZNF627Q7L945 461 aa19.36■□□□□ 0.69
TRIM65-202ENST00000540128 WFDC8Q8IUA0 241 aa19.36■□□□□ 0.69
TRIM65-202ENST00000540128 GNPDA2Q8TDQ7 276 aa19.36■□□□□ 0.69
TRIM65-202ENST00000540128 ZNF837Q96EG3 531 aaPredicted RBP19.36■□□□□ 0.69
TRIM65-202ENST00000540128 RSRC1Q96IZ7 334 aaKnown RBP19.36■□□□□ 0.69
TRIM65-202ENST00000540128 GPX7Q96SL4 187 aaPredicted RBP19.36■□□□□ 0.69
TRIM65-202ENST00000540128 YY1AP1Q9H869 796 aa19.36■□□□□ 0.69
TRIM65-202ENST00000540128 OBP2BQ9NPH6 170 aa19.36■□□□□ 0.69
TRIM65-202ENST00000540128 ZNF346Q9UL40 294 aaKnown RBP19.36■□□□□ 0.69
TRIM65-202ENST00000540128 ROS1P08922 2347 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 CADP27708 2225 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 MCIDASD6RGH6 385 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 TRMUO75648 421 aaKnown RBP19.35■□□□□ 0.69
TRIM65-202ENST00000540128 NDUFB2O95178 105 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 CST1P01037 141 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 CD14P08571 375 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 ACADSP16219 412 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 ZNF133P52736 654 aaPredicted RBP19.35■□□□□ 0.69
TRIM65-202ENST00000540128 FXYD6P3P58550 94 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 ARF1P84077 181 aaKnown RBP19.35■□□□□ 0.69
TRIM65-202ENST00000540128 C1orf146Q5VVC0 180 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 FAM205BPQ63HN1 556 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 NMD3Q96D46 503 aaKnown RBP19.35■□□□□ 0.69
TRIM65-202ENST00000540128 DUS3LQ96G46 650 aaKnown RBP19.35■□□□□ 0.69
TRIM65-202ENST00000540128 NDEL1Q9GZM8 345 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 NGBQ9NPG2 151 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 SAMHD1Q9Y3Z3 626 aaKnown RBP19.35■□□□□ 0.69
TRIM65-202ENST00000540128 AKAP6Q13023 2319 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 FBN2P35556 2912 aa19.35■□□□□ 0.69
TRIM65-202ENST00000540128 ZNF99A8MXY4 864 aaPredicted RBP19.34■□□□□ 0.69
TRIM65-202ENST00000540128 CCNB2O95067 398 aa19.34■□□□□ 0.69
TRIM65-202ENST00000540128 PAX7P23759 505 aa19.34■□□□□ 0.69
TRIM65-202ENST00000540128 TSPAN31Q12999 210 aa19.34■□□□□ 0.69
TRIM65-202ENST00000540128 MICAQ29983 383 aa19.34■□□□□ 0.69
TRIM65-202ENST00000540128 TBRG1Q3YBR2 411 aa19.34■□□□□ 0.69
TRIM65-202ENST00000540128 IGFN1Q86VF2 1251 aa19.34■□□□□ 0.69
TRIM65-202ENST00000540128 ZNF519Q8TB69 540 aa19.34■□□□□ 0.69
TRIM65-202ENST00000540128 POLDIP3Q9BY77 421 aaKnown RBP19.34■□□□□ 0.69
TRIM65-202ENST00000540128 ULBP2Q9BZM5 246 aa19.34■□□□□ 0.69
TRIM65-202ENST00000540128 CLEC4MQ9H2X3 399 aaPredicted RBP19.34■□□□□ 0.69
TRIM65-202ENST00000540128 NELFAQ9H3P2 528 aa19.34■□□□□ 0.69
TRIM65-202ENST00000540128 NRIP3Q9NQ35 241 aa19.34■□□□□ 0.69
TRIM65-202ENST00000540128 AMDHD2Q9Y303 409 aa19.34■□□□□ 0.69
TRIM65-202ENST00000540128 ARPC4-TTLL3A0A0A6YYG9 625 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.33■□□□□ 0.68
TRIM65-202ENST00000540128 A6NIZ1 184 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 CDH2P19022 906 aaPredicted RBP19.33■□□□□ 0.68
TRIM65-202ENST00000540128 NR1H2P55055 460 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 RAP1BP61224 184 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 RAP1AP62834 184 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 PPP1R8Q12972 351 aaKnown RBP19.33■□□□□ 0.68
TRIM65-202ENST00000540128 CCNIQ14094 377 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 HIKESHIQ53FT3 197 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 THSD4Q6ZMP0 1018 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 DPY19L2P2Q6ZN68 376 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 FAM122BQ7Z309 247 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 TMEM200AQ86VY9 491 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 ARIH2OSQ8N7S6 290 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 TSPAN32Q96QS1 320 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 KCNK17Q96T54 332 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 ALG12Q9BV10 488 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 KATNB1Q9BVA0 655 aa19.33■□□□□ 0.68
TRIM65-202ENST00000540128 CIB2O75838 187 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 GASTP01350 101 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 APEHP13798 732 aaKnown RBP19.32■□□□□ 0.68
TRIM65-202ENST00000540128 RPL4P36578 427 aaKnown RBP19.32■□□□□ 0.68
TRIM65-202ENST00000540128 CLRN1P58418 232 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 ERVK-25P63136 954 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 RFX4Q33E94 735 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 NCMAPQ5T1S8 102 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 SMARCD3Q6STE5 483 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 YTHDF3Q7Z739 585 aaKnown RBP19.32■□□□□ 0.68
TRIM65-202ENST00000540128 CDC20BQ86Y33 519 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 CCDC36Q8IYA8 594 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 NOXO1Q8NFA2 376 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 OR9Q2Q8NGE9 314 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 OR52N5Q8NH56 324 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 HDAC2Q92769 488 aaKnown RBP19.32■□□□□ 0.68
TRIM65-202ENST00000540128 MCHR2Q969V1 340 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 PIK3IP1Q96FE7 263 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 LURAP1Q96LR2 239 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 TMEM204Q9BSN7 226 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 DGCR6LQ9BY27 220 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 ARMC1Q9NVT9 282 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 DNAJB9Q9UBS3 223 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 POFUT2Q9Y2G5 429 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 MAGED1Q9Y5V3 778 aaPredicted RBP19.32■□□□□ 0.68
TRIM65-202ENST00000540128 U3KQV3 271 aa19.32■□□□□ 0.68
TRIM65-202ENST00000540128 POLQO75417 2590 aa19.31■□□□□ 0.68
TRIM65-202ENST00000540128 A0A1W2PPR1 153 aa19.31■□□□□ 0.68
TRIM65-202ENST00000540128 ARRDC5A6NEK1 342 aa19.31■□□□□ 0.68
TRIM65-202ENST00000540128 DPRXA6NFQ7 191 aa19.31■□□□□ 0.68
TRIM65-202ENST00000540128 DHHO43323 396 aa19.31■□□□□ 0.68
TRIM65-202ENST00000540128 AHCYL1O43865 530 aa19.31■□□□□ 0.68
TRIM65-202ENST00000540128 TXNDC12O95881 172 aa19.31■□□□□ 0.68
TRIM65-202ENST00000540128 WNT11O96014 354 aa19.31■□□□□ 0.68
TRIM65-202ENST00000540128 QDPRP09417 244 aa19.31■□□□□ 0.68
TRIM65-202ENST00000540128 ACVR1BP36896 505 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms