RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 DSCR3O14972 297 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 HEXBP07686 556 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 RAB40ALP0C0E4 278 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 OR8U9P0C7N5 309 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 UBL4AP11441 157 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 AKR1C2P52895 323 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 UBE2IP63279 158 aaKnown RBP9.15□□□□□ -0.94
TRAF1-202ENST00000540010 MRPS10P82664 201 aaKnown RBP9.15□□□□□ -0.94
TRAF1-202ENST00000540010 AKR1C1Q04828 323 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 PRAMEF8Q5VWM4 474 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 PRAMEF7Q5VXH5 474 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 PRSS41Q7RTY9 318 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 MCATQ8IVS2 390 aaKnown RBP9.15□□□□□ -0.94
TRAF1-202ENST00000540010 OR6V1Q8N148 313 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 FAM174AQ8TBP5 190 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 RAB40AQ8WXH6 277 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 KIAA1143Q96AT1 154 aaPredicted RBP9.15□□□□□ -0.94
TRAF1-202ENST00000540010 CEP250Q9BV73 2442 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 XIRP2A4UGR9 3374 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 ARHGEF17Q96PE2 2063 aaPredicted RBP9.15□□□□□ -0.94
TRAF1-202ENST00000540010 SELENOFO60613 162 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF780AO75290 641 aaPredicted RBP9.15□□□□□ -0.94
TRAF1-202ENST00000540010 HBQ1P09105 142 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 OR1D4P47884 311 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 COL19A1Q14993 1142 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 RBMS2Q15434 407 aaKnown RBP9.15□□□□□ -0.94
TRAF1-202ENST00000540010 HEPHL1Q6MZM0 1159 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 UNQ6126/PRO20091Q6UXV3 157 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 RNF113BQ8IZP6 322 aaKnown RBP9.15□□□□□ -0.94
TRAF1-202ENST00000540010 STEAP2Q8NFT2 490 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 OR6F1Q8NGZ6 308 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 OR52I2Q8NH67 350 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 ARL11Q969Q4 196 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 C20orf85Q9H1P6 137 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 SEMA6CQ9H3T2 930 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 PPP4R1LQ9P1A2 415 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 HHLA2Q9UM44 414 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 HIF3AQ9Y2N7 669 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 MRPS2Q9Y399 296 aaKnown RBP9.15□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF337Q9Y3M9 751 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 TDRD6O60522 2096 aaKnown RBP9.15□□□□□ -0.94
TRAF1-202ENST00000540010 A0A0A6YYJ9 748 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 B8ZZF3 427 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 M0QYG6 137 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 GAAP10253 952 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 SRMP19623 302 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 PRKAR1BP31321 381 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 SLC26A5P58743 744 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 GPLD1P80108 840 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 CCDC71Q8IV32 467 aaPredicted RBP9.15□□□□□ -0.95
TRAF1-202ENST00000540010 C19orf47Q8N9M1 422 aaKnown RBP9.15□□□□□ -0.95
TRAF1-202ENST00000540010 SLC22A8Q8TCC7 542 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 ZDHHC12Q96GR4 267 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 MED30Q96HR3 178 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 DEFB126Q9BYW3 111 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 TESQ9UGI8 421 aaKnown RBP9.15□□□□□ -0.95
TRAF1-202ENST00000540010 CAMK2AQ9UQM7 478 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 B3GALT1Q9Y5Z6 326 aa9.15□□□□□ -0.95
TRAF1-202ENST00000540010 SPTA1P02549 2419 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 TMEM82A0PJX8 343 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 TNFSF14O43557 240 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF254O75437 659 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 PNMTP11086 282 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 POU3F3P20264 500 aaPredicted RBP9.14□□□□□ -0.95
TRAF1-202ENST00000540010 SLC9A3R2Q15599 337 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 EEF1A1P5Q5VTE0 462 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 Q7L0L9 218 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 PXKQ7Z7A4 578 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 KDM8Q8N371 416 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 PLPP7Q8NBV4 271 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF680Q8NEM1 530 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 DIO2Q92813 273 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 RBPMSQ93062 196 aaKnown RBP9.14□□□□□ -0.95
TRAF1-202ENST00000540010 SLC35A4Q96G79 324 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 MAP3K3Q99759 626 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 NUDT22Q9BRQ3 303 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 CBLCQ9ULV8 474 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 KCNE3Q9Y6H6 103 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 APC2O95996 2303 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 REV3LO60673 3130 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 TRIM64A6NGJ6 449 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 TNFSF12O43508 249 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 TSPAN15O95858 294 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 S100A11P31949 105 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 CAMLGP49069 296 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 CBFBQ13951 182 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 GNMTQ14749 295 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 SSX1Q16384 188 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 PLEKHN1Q494U1 663 aaPredicted RBP9.14□□□□□ -0.95
TRAF1-202ENST00000540010 UBE2NLQ5JXB2 153 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 SLC6A19Q695T7 634 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF620Q6ZNG0 422 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 ABHD12BQ7Z5M8 362 aaPredicted RBP9.14□□□□□ -0.95
TRAF1-202ENST00000540010 RDH10Q8IZV5 341 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 OR7G2Q8NG99 324 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 GPR32P1Q8NGA4 272 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 ZG16BQ96DA0 208 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 TSSK2Q96PF2 358 aa9.14□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF442Q9H7R0 627 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms