RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 OR10G3Q8NGC4 313 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 OR51L1Q8NGJ5 315 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 OR6N2Q8NGY6 317 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 ZDHHC16Q969W1 377 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 UBL7Q96S82 380 aaPredicted RBP9.17□□□□□ -0.94
SPARC-209ENST00000539687 ATF6BQ99941 703 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 GPR87Q9BY21 358 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 ANGPTL4Q9BY76 406 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 SRRQ9GZT4 340 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 SYT4Q9H2B2 425 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 SRA1Q9HD15 236 aaKnown RBP9.17□□□□□ -0.94
SPARC-209ENST00000539687 MED11Q9P086 117 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 B9D1Q9UPM9 204 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 RPH3AQ9Y2J0 694 aaPredicted RBP9.17□□□□□ -0.94
SPARC-209ENST00000539687 V9GYH0 126 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 ADAMTS9Q9P2N4 1935 aa9.17□□□□□ -0.94
SPARC-209ENST00000539687 ZDBF2Q9HCK1 2354 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 ARID1BQ8NFD5 2236 aaPredicted RBP9.16□□□□□ -0.94
SPARC-209ENST00000539687 LOC102725191A0A1B0GVB3 256 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 SLC22A23A1A5C7 686 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 FUOMA2VDF0 154 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 LIPT2A6NK58 231 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 PROB1E7EW31 1015 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 LRRTM2O43300 516 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 ZNF254O75437 659 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 KHDRBS3O75525 346 aaKnown RBP9.16□□□□□ -0.94
SPARC-209ENST00000539687 DLGAP3O95886 979 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 HLA-DQA2P01906 255 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 CLEC2LP0C7M8 214 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 ZNF806P0C7X5 589 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 ZNF823P16415 610 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 ALOX5APP20292 161 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 CCR9P51686 369 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 DSCR4P56555 118 aaPredicted RBP9.16□□□□□ -0.94
SPARC-209ENST00000539687 SCAND1P57086 179 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 MLF1P58340 268 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 GPR85P60893 370 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 SLC35A1P78382 337 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 IFITM3Q01628 133 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 CHAF1BQ13112 559 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 ALKBH1Q13686 389 aaKnown RBP9.16□□□□□ -0.94
SPARC-209ENST00000539687 OR7A5Q15622 319 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 LPAL2Q16609 132 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 CDCP2Q5VXM1 449 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 SLC22A10Q63ZE4 541 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 JMJD6Q6NYC1 403 aaPredicted RBP9.16□□□□□ -0.94
SPARC-209ENST00000539687 SFXN4Q6P4A7 337 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 FDX2Q6P4F2 183 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 DEGS2Q6QHC5 323 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 UNQ9370/PRO34162Q6UXP9 181 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 C16orf47Q6ZP98 133 aaPredicted RBP9.16□□□□□ -0.94
SPARC-209ENST00000539687 SSX6Q7RTT6 188 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 RPS19BP1Q86WX3 136 aaKnown RBP9.16□□□□□ -0.94
SPARC-209ENST00000539687 RAB43Q86YS6 212 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 PM20D2Q8IYS1 436 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 YIPF7Q8N8F6 280 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 OR11G2Q8NGC1 345 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 OTOSQ8NHW6 89 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 ZPLD1Q8TCW7 415 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 PAQR8Q8TEZ7 354 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 ASB10Q8WXI3 467 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 TMEM41AQ96HV5 264 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 IP6K3Q96PC2 410 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 RBP7Q96R05 134 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 GALNT9Q9HCQ5 603 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 ACOXLQ9NUZ1 547 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 HPF1Q9NWY4 346 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 COMMD3Q9UBI1 195 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 KCNG2Q9UJ96 466 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 IKZF2Q9UKS7 526 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 TCFL5Q9UL49 500 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 COPS3Q9UNS2 423 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 VDAC3Q9Y277 283 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 GRIP1Q9Y3R0 1128 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 SIRT4Q9Y6E7 314 aaPredicted RBP9.16□□□□□ -0.94
SPARC-209ENST00000539687 CHCHD2Q9Y6H1 151 aaPredicted RBP9.16□□□□□ -0.94
SPARC-209ENST00000539687 GON4LQ3T8J9 2241 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 RP1P56715 2156 aa9.16□□□□□ -0.94
SPARC-209ENST00000539687 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.15□□□□□ -0.94
SPARC-209ENST00000539687 E9PI62 339 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 DNPH1O43598 174 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 TLX3O43711 291 aaPredicted RBP9.15□□□□□ -0.94
SPARC-209ENST00000539687 SLC16A7O60669 478 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 EIF1BO60739 113 aaKnown RBP9.15□□□□□ -0.94
SPARC-209ENST00000539687 ZNF354AO60765 605 aaPredicted RBP9.15□□□□□ -0.94
SPARC-209ENST00000539687 AQP8O94778 261 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 PMS2P2O95744 297 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 HRGP04196 525 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 SERPINA7P05543 415 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 HNRNPCP07910 306 aaKnown RBP eCLIP9.15□□□□□ -0.94
SPARC-209ENST00000539687 SPTBP11277 2137 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 APEX1P27695 318 aaKnown RBP9.15□□□□□ -0.94
SPARC-209ENST00000539687 RBMS1P29558 406 aaKnown RBP9.15□□□□□ -0.94
SPARC-209ENST00000539687 PI4KAP42356 2102 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 NR4A2P43354 598 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 INPP1P49441 399 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 EVX1P49640 407 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 PITPNAQ00169 270 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 HSF1Q00613 529 aa9.15□□□□□ -0.94
SPARC-209ENST00000539687 ROM1Q03395 351 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms