RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 IDH3GP51553 393 aaPredicted RBP10.04□□□□□ -0.8
RTN3-209ENST00000538995 SNRPD2P62316 118 aaKnown RBP10.04□□□□□ -0.8
RTN3-209ENST00000538995 EFNB3Q15768 340 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 SWI5Q1ZZU3 235 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 GSG1Q2KHT4 349 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 NRN1LQ496H8 165 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 CLEC2AQ6UVW9 174 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 PIWIL3Q7Z3Z3 882 aaKnown RBP10.04□□□□□ -0.8
RTN3-209ENST00000538995 DPPA2Q7Z7J5 298 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 MDP1Q86V88 176 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 TREML1Q86YW5 311 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 NKAIN4Q8IVV8 208 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 WDFY1Q8IWB7 410 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 OFCC1Q8IZS5 231 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 LRRC17Q8N6Y2 441 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 PFN4Q8NHR9 129 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 GEMIN6Q8WXD5 167 aaKnown RBP10.04□□□□□ -0.8
RTN3-209ENST00000538995 TPD52L3Q96J77 140 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 SEPHS2Q99611 448 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 REG4Q9BYZ8 158 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 ABCD2Q9UBJ2 740 aa10.04□□□□□ -0.8
RTN3-209ENST00000538995 A0A1W2PRG6 482 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 ZNF503-AS2A6NEH8 195 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 VSTM5A8MXK1 200 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 B9A039 149 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 MCIDASD6RGH6 385 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 BLOC1S5-TXNDC5H3BN57 136 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 CXCR6O00574 342 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 SSX4O60224 188 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 SNX3O60493 162 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 SHOX2O60902 331 aaPredicted RBP10.03□□□□□ -0.8
RTN3-209ENST00000538995 UBL3O95164 117 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 NR2C1P13056 603 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 B4GALT1P15291 398 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 FUT1P19526 365 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 CALCRP30988 508 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 GSK3BP49841 420 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 EFNA4P52798 201 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 RPL18Q07020 188 aaKnown RBP10.03□□□□□ -0.8
RTN3-209ENST00000538995 NPRL3Q12980 569 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 ADIPOQQ15848 244 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 MST1LQ2TV78 715 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 CBLL1Q75N03 491 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 MYPOPQ86VE0 399 aaPredicted RBP10.03□□□□□ -0.8
RTN3-209ENST00000538995 OR10H5Q8NGA6 315 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 ELAC2Q9BQ52 826 aaKnown RBP10.03□□□□□ -0.8
RTN3-209ENST00000538995 RHNO1Q9BSD3 238 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 SEC61A2Q9H9S3 476 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 INIPQ9NRY2 104 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 C20orf141Q9NUB4 165 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 A4GNTQ9UNA3 340 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 FKBP7Q9Y680 259 aa10.03□□□□□ -0.8
RTN3-209ENST00000538995 ALPK2Q86TB3 2170 aa10.02□□□□□ -0.8
RTN3-209ENST00000538995 GSTA4O15217 222 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 DHHO43323 396 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 MGRN1O60291 552 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 RAB36O95755 333 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 HLA-HP01893 362 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 CELA3BP08861 270 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 OR4A8P0C604 315 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 OR8G3PP0DMU2 310 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 CD79AP11912 226 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 SLC25A16P16260 332 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 ZNF14P17017 642 aaPredicted RBP10.02□□□□□ -0.81
RTN3-209ENST00000538995 LSP1P33241 339 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 PPOXP50336 477 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 SEC24CP53992 1094 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 HGFACQ04756 655 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 MELKQ14680 651 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 TAF11Q15544 211 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 HIST3H3Q16695 136 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 ANKDD1AQ495B1 522 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 IFI44LQ53G44 452 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 Q71RC1 249 aaPredicted RBP10.02□□□□□ -0.81
RTN3-209ENST00000538995 VTCN1Q7Z7D3 282 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 NOXO1Q8NFA2 376 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 ASB10Q8WXI3 467 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 FBXO17Q96EF6 278 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 ZNF75AQ96N20 296 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 KCTD14Q9BQ13 255 aaPredicted RBP10.02□□□□□ -0.81
RTN3-209ENST00000538995 MRPL13Q9BYD1 178 aaKnown RBP10.02□□□□□ -0.81
RTN3-209ENST00000538995 PLK3Q9H4B4 646 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 ANKRD19PQ9H560 264 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 NOX3Q9HBY0 568 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 MYOZ1Q9NP98 299 aaPredicted RBP10.02□□□□□ -0.81
RTN3-209ENST00000538995 SPAG4Q9NPE6 437 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 TMEM38BQ9NVV0 291 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 ZNF224Q9NZL3 707 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 HIF3AQ9Y2N7 669 aa10.02□□□□□ -0.81
RTN3-209ENST00000538995 IGHV4-30-2A0A087WSY4 118 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 GMNCA6NCL1 334 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 FARS2O95363 451 aaKnown RBP10.01□□□□□ -0.81
RTN3-209ENST00000538995 ZNF682O95780 498 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 F12P00748 615 aaPredicted RBP10.01□□□□□ -0.81
RTN3-209ENST00000538995 SERPINA1P01009 418 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 NPR2P20594 1047 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 DRD4P21917 467 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 AQP2P41181 271 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 ZNF133P52736 654 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms