RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 CMC2Q9NRP2 79 aa20.81■□□□□ 0.92
TMEM260-202ENST00000538838 NDRG4Q9ULP0 352 aaKnown RBP20.81■□□□□ 0.92
TMEM260-202ENST00000538838 SLC16A6O15403 523 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 LRRTM2O43300 516 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 CLIC3O95833 236 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 IGHV3-9P01782 118 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 IGHG1P01857 330 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 CTSSP25774 331 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 CDKN2AP42771 156 aaKnown RBP20.8■□□□□ 0.92
TMEM260-202ENST00000538838 ADARB1P78563 741 aaKnown RBP20.8■□□□□ 0.92
TMEM260-202ENST00000538838 ZNF362Q5T0B9 420 aaPredicted RBP20.8■□□□□ 0.92
TMEM260-202ENST00000538838 C6orf52Q5T4I8 152 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 CCDC71Q8IV32 467 aaPredicted RBP20.8■□□□□ 0.92
TMEM260-202ENST00000538838 FAM81AQ8TBF8 368 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 RND1Q92730 232 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 ZNF566Q969W8 418 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 APH1AQ96BI3 265 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 KCNK17Q96T54 332 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 NMNAT3Q96T66 252 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 SFXN3Q9BWM7 321 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 TEX12Q9BXU0 123 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 PARPBPQ9NWS1 579 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 HIVEP3Q5T1R4 2406 aa20.8■□□□□ 0.92
TMEM260-202ENST00000538838 NCOA6Q14686 2063 aaPredicted RBP20.79■□□□□ 0.92
TMEM260-202ENST00000538838 HSPB2A8KAH6 182 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 PYCARD-AS1I3L0S3 204 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 SLC43A1O75387 559 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 HMGN1P05114 100 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 CAPGP40121 348 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 CLRN1P58418 232 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 HSPB2Q16082 182 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 LEG1Q6P5S2 330 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 BTLAQ7Z6A9 289 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 ADCK1Q86TW2 530 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 ZNF100Q8IYN0 542 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 CYB561A3Q8NBI2 242 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 SLC37A3Q8NCC5 494 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 STARD4Q96DR4 205 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 SLC38A2Q96QD8 506 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 MRPL13Q9BYD1 178 aaKnown RBP20.79■□□□□ 0.92
TMEM260-202ENST00000538838 SLCO5A1Q9H2Y9 848 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 FN3KQ9H479 309 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 KLHL21Q9UJP4 597 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 GPR52Q9Y2T5 361 aa20.79■□□□□ 0.92
TMEM260-202ENST00000538838 A0A1B0GUH1 482 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 RIIAD1A6NNX1 92 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 CD47Q08722 323 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 DBPQ10586 325 aaPredicted RBP20.78■□□□□ 0.92
TMEM260-202ENST00000538838 KEAP1Q14145 624 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 CRMP1Q14194 572 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 SNAPC1Q16533 368 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 PHYHD1Q5SRE7 291 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 CCDC120Q96HB5 630 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 PLEKHA8Q96JA3 519 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 PRRG3Q9BZD7 231 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 PRSS50Q9UI38 385 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 FOXD3Q9UJU5 478 aaPredicted RBP20.78■□□□□ 0.92
TMEM260-202ENST00000538838 RNF6Q9Y252 685 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 PRSS37A4D1T9 235 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 PRKYO43930 277 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 UPK3AO75631 287 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 IFNGP01579 166 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 ZNF3P17036 446 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 BMP5P22003 454 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 OR3A2P47893 321 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 CSNK1A1P48729 337 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 CDC42P60953 191 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 ADORA2A-AS1P86434 159 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 FMODQ06828 376 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 C4orf17Q53FE4 359 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 TSPO2Q5TGU0 170 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 TTC23Q5W5X9 447 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 TFAP2EQ6VUC0 442 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 C20orf196Q8IYI0 205 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 NPEPL1Q8NDH3 523 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 OR6N1Q8NGY5 312 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 TFAP2CQ92754 450 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 ALKBH3Q96Q83 286 aaPredicted RBP20.78■□□□□ 0.92
TMEM260-202ENST00000538838 ZNF184Q99676 751 aaPredicted RBP20.78■□□□□ 0.92
TMEM260-202ENST00000538838 SYT4Q9H2B2 425 aa20.78■□□□□ 0.92
TMEM260-202ENST00000538838 PCNX1Q96RV3 2341 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 SLC22A23A1A5C7 686 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 FAM183AA6NL82 134 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 H0YAE9 185 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 M0R3G1 203 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 SMNDC1O75940 238 aaKnown RBP eCLIP20.77■□□□□ 0.92
TMEM260-202ENST00000538838 GNAO1P09471 354 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 HSPA13P48723 471 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 PCYT1AP49585 367 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 TCEANCQ8N8B7 351 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 TMEM54Q969K7 222 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 UBE2FQ969M7 185 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 ALG12Q9BV10 488 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 OPN3Q9H1Y3 402 aaPredicted RBP20.77■□□□□ 0.92
TMEM260-202ENST00000538838 SLC7A10Q9NS82 523 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 IMPAD1Q9NX62 359 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 VSX1Q9NZR4 365 aaPredicted RBP20.77■□□□□ 0.92
TMEM260-202ENST00000538838 PROCRQ9UNN8 238 aa20.77■□□□□ 0.92
TMEM260-202ENST00000538838 OR6C68A6NDL8 312 aa20.76■□□□□ 0.91
TMEM260-202ENST00000538838 CGAP01215 116 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms