RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 ABHD16AO95870 558 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 HLA-DQA2P01906 255 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ANXA2P07355 339 aaKnown RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 YES1P07947 543 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 CD63P08962 238 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ATXN8OSP0DMR3 200 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 OR8G3PP0DMU2 310 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 NR2C1P13056 603 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ATF1P18846 271 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ALOX5APP20292 161 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 AHCYP23526 432 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 CFPP27918 469 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 SLC6A1P30531 599 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 PSMB10P40306 273 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 RIDAP52758 137 aaKnown RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 EFNA3P52797 238 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 CAPZA1P52907 286 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 HCCSP53701 268 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 RAG2P55895 527 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 OR10A3P58181 314 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ARPC4P59998 168 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 CCL7P80098 99 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 MRPS15P82914 257 aaKnown RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 ROM1Q03395 351 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 PUDPQ08623 228 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 DMWDQ09019 674 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 SNTA1Q13424 505 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 TOMM34Q15785 309 aaPredicted RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 ACKR1Q16570 336 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 TATDN3Q17R31 274 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 HLA-BQ31612 363 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 SLC25A35Q3KQZ1 300 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 TBRG1Q3YBR2 411 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 SLC25A53Q5H9E4 307 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 CEP78Q5JTW2 689 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ATAD3CQ5T2N8 411 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 LIPNQ5VXI9 398 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ZNF385CQ66K41 422 aaPredicted RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 THOC7Q6I9Y2 204 aaKnown RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 TMEM81Q6P7N7 255 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 POMZP3Q6PJE2 187 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 DEGS2Q6QHC5 323 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ZNF574Q6ZN55 896 aaPredicted RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 ADGRG3Q86Y34 549 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 PM20D2Q8IYS1 436 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ZNF679Q8IYX0 411 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 TCTE3Q8IZS6 198 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 OR6V1Q8N148 313 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 GHDCQ8N2G8 530 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 TOMM5Q8N4H5 51 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ZNF511Q8NB15 262 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 NLGN4YQ8NFZ3 816 aaPredicted RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 OR13C5Q8NGS8 318 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 OR2G2Q8NGZ5 317 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 IFI44Q8TCB0 444 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 LGALS14Q8TCE9 139 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 UBASH3BQ8TF42 649 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 DUSP19Q8WTR2 217 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 SLC25A43Q8WUT9 341 aaPredicted RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 THEM6Q8WUY1 208 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 SMIM4Q8WVI0 70 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 SLC25A36Q96CQ1 311 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 NXPE2Q96DL1 559 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 C4orf45Q96LM5 186 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 DCBLD2Q96PD2 775 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 OR8B4Q96RC9 309 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 GFM1Q96RP9 751 aaKnown RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 CTRCQ99895 268 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 PDCD1LG2Q9BQ51 273 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 TTTY10Q9BZA0 68 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ACTR6Q9GZN1 396 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ABCG5Q9H222 651 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 MMP28Q9H239 520 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 PPIL3Q9H2H8 161 aaKnown RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 METTL7AQ9H8H3 244 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 PLEKHA1Q9HB21 404 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 NEK6Q9HC98 313 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 SRA1Q9HD15 236 aaKnown RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 CHST11Q9NPF2 352 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 FANCFQ9NPI8 374 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 SLC22A11Q9NSA0 550 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ING3Q9NXR8 418 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 ALKBH4Q9NXW9 302 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 TAS2R5Q9NYW4 299 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 KLRF1Q9NZS2 232 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 EMC3Q9P0I2 261 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 PPP4R1LQ9P1A2 415 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 PISDQ9UG56 409 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 MRM2Q9UI43 246 aaKnown RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 ATXN7L1Q9ULK2 861 aaPredicted RBP5.99□□□□□ -1.45
USP28-206ENST00000538224 NPIPA1Q9UND3 350 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 B9D1Q9UPM9 204 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 B3GALT5Q9Y2C3 310 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 NUBP2Q9Y5Y2 271 aa5.99□□□□□ -1.45
USP28-206ENST00000538224 KNL1Q8NG31 2342 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 ARID1BQ8NFD5 2236 aaPredicted RBP5.98□□□□□ -1.45
USP28-206ENST00000538224 A0A087WZY1 265 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 TRBV5-7A0A0A0MS05 114 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 IGLV1-36A0A0B4J1U3 117 aa5.98□□□□□ -1.45
USP28-206ENST00000538224 LY6G6EA0A0G2JKS1 128 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms