RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 C17orf78Q8N4C9 275 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CLDN22Q8N7P3 220 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 PAPD5Q8NDF8 572 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 NOXO1Q8NFA2 376 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 OR6N1Q8NGY5 312 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ZNF519Q8TB69 540 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 HDAC2Q92769 488 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ZNF566Q969W8 418 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 NMD3Q96D46 503 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 PLPPR2Q96GM1 343 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 RSRC1Q96IZ7 334 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 USB1Q9BQ65 265 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 KATNB1Q9BVA0 655 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ULBP2Q9BZM5 246 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 TXNIPQ9H3M7 391 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 LIME1Q9H400 295 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 PLEKHF2Q9H8W4 249 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 GLTPQ9NZD2 209 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 IL20RAQ9UHF4 553 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ZNF346Q9UL40 294 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ADAM18Q9Y3Q7 739 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 U3KQV3 271 aa9.91□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ABCA4P78363 2273 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ZNF503-AS2A6NEH8 195 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 DPRXA6NFQ7 191 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ZNF99A8MXY4 864 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 EBAG9O00559 213 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 FKBP6O75344 327 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 PLAUP00749 431 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CST1P01037 141 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 IGHG1P01857 330 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CD14P08571 375 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ACADSP16219 412 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 FPR3P25089 353 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 DAP3P51398 398 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 RPL27P61353 136 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ERVK-25P63136 954 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 TUBA1BP68363 451 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 TUBA4AP68366 448 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 MYBPC1Q00872 1141 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ANKDD1AQ495B1 522 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 BEX5Q5H9J7 111 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 NCMAPQ5T1S8 102 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ANKRD16Q6P6B7 361 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 TUBA1AQ71U36 451 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 SYT14Q8NB59 555 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 GPX7Q96SL4 187 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 KCNK17Q96T54 332 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 C1QTNF6Q9BXI9 259 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CCM2LQ9NUG4 571 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 TMCC3Q9ULS5 477 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 SAMHD1Q9Y3Z3 626 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 APCP25054 2843 aa9.9□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CSMD2Q7Z408 3487 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CCNB2O95067 398 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NDUFB2O95178 105 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 GASTP01350 101 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 QDPRP09417 244 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF83P51522 516 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF133P52736 654 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SH3BGRP55822 239 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CLRN1P58418 232 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 FMODQ06828 376 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 BSPH1Q075Z2 132 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 TSPAN31Q12999 210 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 TAF11Q15544 211 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MICAQ29983 383 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MESTQ5EB52 335 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 C1orf146Q5VVC0 180 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 FBXW10Q5XX13 1052 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 KLHL24Q6TFL4 600 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF620Q6ZNG0 422 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF627Q7L945 461 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 HS3ST5Q8IZT8 346 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ARIH2OSQ8N7S6 290 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 AQP11Q8NBQ7 271 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MAGEE2Q8TD90 523 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 GNPDA2Q8TDQ7 276 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 HTRA1Q92743 480 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MCHR2Q969V1 340 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MUCL1Q96DR8 90 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 Q96M85 177 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 FOXB1Q99853 325 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 TMEM204Q9BSN7 226 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 OR52D1Q9H346 318 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 REEP1Q9H902 201 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 KRCC1Q9NPI7 259 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 B3GAT2Q9NPZ5 323 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NRIP3Q9NQ35 241 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF224Q9NZL3 707 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 AMDHD2Q9Y303 409 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ITPR2Q14571 2701 aa9.89□□□□□ -0.83
TNFRSF1A-208ENST00000536194 HEATR1Q9H583 2144 aaKnown RBP9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ARPC4-TTLL3A0A0A6YYG9 625 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CENPBD1B2RD01 187 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 H7C1C5 153 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 IMPA2O14732 288 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 DHHO43323 396 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 TIPRLO75663 272 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SLC2A10O95528 541 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms