RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ANXA2P2A6NMY6 339 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 TMEM150CB9EJG8 249 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 ZNF254O75437 659 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 IGKV3-11P04433 115 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 ANXA2P07355 339 aaKnown RBP14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 TAS2R20P59543 309 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 GLDNQ6ZMI3 551 aaPredicted RBP14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 NLRC3Q7RTR2 1065 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 GKN2Q86XP6 184 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 OR8H3Q8N146 312 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 OR6N2Q8NGY6 317 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 THRSPQ92748 146 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 ADIPOR1Q96A54 375 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 MARVELD3Q96A59 401 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 TGM7Q96PF1 710 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 INTS14Q96SY0 518 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 UTP23Q9BRU9 249 aaKnown RBP14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 TAS2R5Q9NYW4 299 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 H7C1C5 153 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 ICMTO60725 284 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 AKR7A3O95154 331 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 IFNA7P01567 189 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 IFNGR1P15260 489 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 CXCR1P25024 350 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 SELENOPP49908 381 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 DCAF7P61962 342 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 LCN6P62502 163 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 RPS15P62841 145 aaKnown RBP14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 SNTA1Q13424 505 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 Q6ZTK2 550 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 SPICQ8N5J4 248 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 THEM6Q8WUY1 208 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 MCHR2Q969V1 340 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 TMEM106AQ96A25 262 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 DCBLD2Q96PD2 775 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 OR1F2PQ96R84 312 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 SYT4Q9H2B2 425 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 BRWD1Q9NSI6 2320 aa14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 ARPC1BO15143 372 aaKnown RBP14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 XRCC3O43542 346 aa14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 SNAPC5O75971 98 aa14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 NME1P15531 152 aaKnown RBP14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 PPM1FP49593 454 aaPredicted RBP14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 ZNF81P51508 661 aa14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 MECP2P51608 486 aaKnown RBP14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 BLVRAP53004 296 aa14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 GFERP55789 205 aa14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 TMPRSS12Q86WS5 348 aa14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 OTOSQ8NHW6 89 aa14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 AUP1Q9Y679 476 aa14.52□□□□□ -0.08
CHMP1A-202ENST00000535997 CACNA1CQ13936 2221 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 TRAV8-7A0A075B6U6 113 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 A0A1B0GTH9 108 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 A8MUA0 341 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 HCRTR2O43614 444 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 GLSO94925 669 aaPredicted RBP14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 MAS1P04201 325 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 SDHBP21912 280 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 CFPP27918 469 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 ZNF117Q03924 483 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 CBFBQ13951 182 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 SLC25A25Q6KCM7 469 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 FDX2Q6P4F2 183 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 ZNF227Q86WZ6 799 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 ELMOD2Q8IZ81 293 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 SMRP1Q8NCR6 262 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 DNAAF1Q8NEP3 725 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 ZNF721Q8TF20 911 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 GPN1Q9HCN4 374 aaPredicted RBP14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 STEAP1Q9UHE8 339 aa14.52□□□□□ -0.09
CHMP1A-202ENST00000535997 IGKV3D-11A0A0A0MRZ8 115 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 G3V3Q6 166 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 XKRYO14609 159 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 CDC40O60508 579 aaKnown RBP eCLIP14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 ICOSLGO75144 302 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 NDUFB6O95139 128 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 DDAH2O95865 285 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 BGLAPP02818 100 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 IL5P05113 134 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 CSRP1P21291 193 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 MAOBP27338 520 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 ITPKBP27987 946 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 DCTDP32321 178 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 LINC00303Q3SY05 128 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 Q6ZS52 159 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 TTLL10Q6ZVT0 673 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 PM20D2Q8IYS1 436 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 PRSS35Q8N3Z0 413 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 MEIOBQ8N635 442 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 LMX1AQ8TE12 382 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 ZDHHC12Q96GR4 267 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 DPCDQ9BVM2 203 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 RAB33BQ9H082 229 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 SLC2A4RGQ9NR83 387 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 CUTCQ9NTM9 273 aa14.51□□□□□ -0.09
CHMP1A-202ENST00000535997 TRAV36DV7A0A075B6V5 113 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 A0A1W2PQD3 144 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 SNRPGP15A8MWD9 76 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 EIF4E2O60573 245 aaKnown RBP14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 RBBP9O75884 186 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms