RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 AURKBQ96GD4 344 aaPredicted RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 POM121Q96HA1 1249 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 ITCHQ96J02 903 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 APOL4Q9BPW4 351 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 HOPXQ9BPY8 73 aaPredicted RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 TMEM246Q9BRR3 403 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 TMEM204Q9BSN7 226 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 GSX2Q9BZM3 304 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 ESRP2Q9H6T0 727 aaKnown RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 MTHFD2LQ9H903 347 aaPredicted RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 B3GNT2Q9NY97 397 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 OSGIN1Q9UJX0 560 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 HDGFL3Q9Y3E1 203 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 SNX5Q9Y5X3 404 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 IGKV3D-15A0A087WSY6 115 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 DHRS12A0PJE2 317 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ZC3H12DA2A288 527 aaKnown RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF716A6NP11 495 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 LOC110117498-PIK3R3F6TDL0 507 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 H7C1Q1 480 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 TRIM77I1YAP6 450 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ANGPT2O15123 496 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF208O43345 1280 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 RAMP1O60894 148 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 RAD51DO75771 328 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 GKN3PP0CG01 181 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 HOXB4P17483 251 aaPredicted RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 GGT1P19440 569 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 COX5AP20674 150 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 FKBP2P26885 142 aaKnown RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ERP29P30040 261 aaKnown RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 CBX5P45973 191 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 SLC9A3P48764 834 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 CLK1P49759 484 aaKnown RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 MVDP53602 400 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 CRISP3P54108 245 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 RPS4XP62701 263 aaKnown RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 BSPH1Q075Z2 132 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 AQP6Q13520 282 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 PPA1Q15181 289 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 MAPK11Q15759 364 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 FBXW9Q5XUX1 488 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ADAM5Q6NVV9 412 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 PRSS57Q6UWY2 283 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 CLEC9AQ6UXN8 241 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 MSANTD1Q6ZTZ1 278 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 CREB3L2Q70SY1 520 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 EPHX4Q8IUS5 362 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF440Q8IYI8 595 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 CIARTQ8N365 385 aaPredicted RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 CADM2Q8N3J6 435 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF611Q8N823 705 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 KBTBD8Q8NFY9 601 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 CYGBQ8WWM9 190 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 NEUROG1Q92886 237 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 FBXW5Q969U6 566 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 APH1AQ96BI3 265 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 MUCL1Q96DR8 90 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 TMEM19Q96HH6 336 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 USB1Q9BQ65 265 aaKnown RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 BDH2Q9BUT1 245 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 CCDC32Q9BV29 185 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 NXF2Q9GZY0 626 aaKnown RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 SEMA6AQ9H2E6 1030 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 NIPAL2Q9H841 368 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 TPT1P8Q9HAU6 139 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 CACYBPQ9HB71 228 aaKnown RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 RPRD1BQ9NQG5 326 aaKnown RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 SDR39U1Q9NRG7 319 aaPredicted RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 RLIMQ9NVW2 624 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ADA2Q9NZK5 511 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 CALML5Q9NZT1 146 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ACTR3BQ9P1U1 418 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ABCD2Q9UBJ2 740 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 BAG5Q9UL15 447 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 LAMP3Q9UQV4 416 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF443Q9Y2A4 671 aaPredicted RBP7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 AUP1Q9Y679 476 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 ARID1AO14497 2285 aa7.54□□□□□ -1.2
SFSWAP-202ENST00000535202 DSPPQ9NZW4 1301 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 CIB4A0PJX0 185 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 FAM234BA2RU67 622 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 LINC00862A6NCI5 91 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 DPRXA6NFQ7 191 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF99A8MXY4 864 aaPredicted RBP7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 FAAHO00519 579 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 GPR171O14626 319 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 DNPH1O43598 174 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 MRPL33O75394 65 aaKnown RBP7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 CNOT4O95628 575 aaKnown RBP7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 ITGA2P17301 1181 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 CXCR1P25024 350 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 POLR2IP36954 125 aaKnown RBP7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 SLC1A3P43003 542 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 SLC16A1P53985 500 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 ATP5J2P56134 94 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 SLC35A1P78382 337 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 LTBQ06643 244 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 FAPQ12884 760 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 LARS2Q15031 903 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms