RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 RNF113BQ8IZP6 322 aaKnown RBP11.07□□□□□ -0.64
SCARB1-204ENST00000535005 TEX19Q8NA77 164 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 OR14L1PQ8NHC6 308 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 SLC7A13Q8TCU3 470 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 SLC19A3Q9BZV2 496 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 C11orf54Q9H0W9 315 aaPredicted RBP11.07□□□□□ -0.64
SCARB1-204ENST00000535005 AMBNQ9NP70 447 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 EXOSC4Q9NPD3 245 aaKnown RBP11.07□□□□□ -0.64
SCARB1-204ENST00000535005 A0A087WUU8 490 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 ELOA3DA6NLF2 546 aaPredicted RBP11.06□□□□□ -0.64
SCARB1-204ENST00000535005 NPIPB7O75200 414 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 IGF2P01344 180 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 CELA3AP09093 270 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 GFRA1P56159 465 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 MAB21L1Q13394 359 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 PTGES3Q15185 160 aaKnown RBP11.06□□□□□ -0.64
SCARB1-204ENST00000535005 TOMM20Q15388 145 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 EXOC3L2Q2M3D2 409 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 ELOA3BQ3SY89 546 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 Q5BKY6 102 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 WIPI1Q5MNZ9 446 aaPredicted RBP11.06□□□□□ -0.64
SCARB1-204ENST00000535005 DCST1Q5T197 706 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 PODNL1Q6PEZ8 512 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 LINC00471Q8N535 108 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 ELOA3Q8NG57 546 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 STK35Q8TDR2 534 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 SLC25A43Q8WUT9 341 aaPredicted RBP11.06□□□□□ -0.64
SCARB1-204ENST00000535005 DEDD2Q8WXF8 326 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 SNAPC3Q92966 411 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 HYLS1Q96M11 299 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 FYTTD1Q96QD9 318 aaKnown RBP11.06□□□□□ -0.64
SCARB1-204ENST00000535005 UBL7Q96S82 380 aaPredicted RBP11.06□□□□□ -0.64
SCARB1-204ENST00000535005 SERINC1Q9NRX5 453 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 PLSCR2Q9NRY7 297 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 RBFOX1Q9NWB1 397 aaKnown RBP11.06□□□□□ -0.64
SCARB1-204ENST00000535005 CHRNA9Q9UGM1 479 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 TMCC3Q9ULS5 477 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 RPH3AQ9Y2J0 694 aaPredicted RBP11.06□□□□□ -0.64
SCARB1-204ENST00000535005 BOLA1Q9Y3E2 137 aa11.06□□□□□ -0.64
SCARB1-204ENST00000535005 SPIN1Q9Y657 262 aaPredicted RBP11.06□□□□□ -0.64
SCARB1-204ENST00000535005 ATRXP46100 2492 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 IGKV1D-42A0A075B6H8 117 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 A0A0G2JMP0 313 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 TRBV4-1A0A0J9YWV2 114 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 A0A1B0GVC2 190 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 LINC00862A6NCI5 91 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 ZSCAN5BA6NJL1 495 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 A8MV72 311 aaPredicted RBP11.05□□□□□ -0.64
SCARB1-204ENST00000535005 SHISA8B8ZZ34 492 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 TFECO14948 347 aaPredicted RBP11.05□□□□□ -0.64
SCARB1-204ENST00000535005 ORC5O43913 435 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 TSPAN19P0C672 248 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 CFL1P23528 166 aaKnown RBP11.05□□□□□ -0.64
SCARB1-204ENST00000535005 SDC2P34741 201 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 RAC1P63000 192 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 ALDH6A1Q02252 535 aaKnown RBP11.05□□□□□ -0.64
SCARB1-204ENST00000535005 OCLNQ16625 522 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.05□□□□□ -0.643e-8■□□□□ 8.6
SCARB1-204ENST00000535005 SLC25A30Q5SVS4 291 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 RAET1LQ5VY80 246 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 ZNF324BQ6AW86 544 aaPredicted RBP11.05□□□□□ -0.64
SCARB1-204ENST00000535005 C5orf46Q6UWT4 87 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 Q6ZPB1 254 aaPredicted RBP11.05□□□□□ -0.64
SCARB1-204ENST00000535005 MBOAT2Q6ZWT7 520 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 SLC51BQ86UW2 128 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 NANOGP1Q8N7R0 232 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 YIPF7Q8N8F6 280 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 OR5H6Q8NGV6 325 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 OR52J3Q8NH60 311 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 TMEM239Q8WW34 195 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 COQ7Q99807 217 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 MMP28Q9H239 520 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 SNTG1Q9NSN8 517 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 AUP1Q9Y679 476 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 BOD1L1Q8NFC6 3051 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 PRRC2CQ9Y520 2896 aaKnown RBP11.05□□□□□ -0.64
SCARB1-204ENST00000535005 TMEM72A0PK05 275 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 C12orf71A8MTZ7 269 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 A8MVM7 634 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 SUSD5O60279 629 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 ACTL6AO96019 429 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 IL11P20809 199 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 CLDN20P56880 219 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 BTG1P62324 171 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 CD83Q01151 205 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 SEC23BQ15437 767 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 TRIQKQ629K1 86 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 C3orf33Q6P1S2 294 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 TRILQ7L0X0 811 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 C19orf18Q8NEA5 215 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 OR5M1Q8NGP8 315 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 OR6S1Q8NH40 331 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 NEIL3Q8TAT5 605 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 UBASH3BQ8TF42 649 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 TMEM255BQ8WV15 326 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 SFXN2Q96NB2 322 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 NIPSNAP1Q9BPW8 284 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 POTEKPQ9BYX7 375 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 DEFB127Q9H1M4 99 aa11.05□□□□□ -0.64
SCARB1-204ENST00000535005 TIGARQ9NQ88 270 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms