RNA–Protein interactions for RNA: ENST00000534900.5

PTPN6-205, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 4

Gene PTPN6, Length 538 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-205	ENST00000534900	MUC13	Q9H3R2	512 aa		12.53	□□□□□ -0.4
PTPN6-205	ENST00000534900	OBP2B	Q9NPH6	170 aa		12.53	□□□□□ -0.4
PTPN6-205	ENST00000534900	TMEM5	Q9Y2B1	443 aa		12.53	□□□□□ -0.4
PTPN6-205	ENST00000534900	MAGED1	Q9Y5V3	778 aa	Predicted RBP	12.53	□□□□□ -0.4
PTPN6-205	ENST00000534900	ARPC4-TTLL3	A0A0A6YYG9	625 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	SH3PXD2B	A1X283	911 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	ACOT8	O14734	319 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	PTP4A3	O75365	173 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	TRMU	O75648	421 aa	Known RBP	12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	IGHG1	P01857	330 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	PGA4	P0DJD7	388 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	PGA3	P0DJD8	388 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	RRM2	P31350	389 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	CAPZA2	P47755	286 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	OMP	P47874	163 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	SLC9A3	P48764	834 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	RPS4X	P62701	263 aa	Known RBP	12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	MYBPC1	Q00872	1141 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	BNIP1	Q12981	228 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	TESK1	Q15569	626 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	DEFB113	Q30KQ7	82 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	ANKDD1A	Q495B1	522 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	ZNF672	Q499Z4	452 aa	Predicted RBP	12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	ZBED5	Q49AG3	693 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	DNAL1	Q4LDG9	190 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	C1QTNF12	Q5T7M4	302 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	SLC22A25	Q6T423	547 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	ZNF813	Q6ZN06	617 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	C20orf204	Q6ZNR8	217 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	PIWIL3	Q7Z3Z3	882 aa	Known RBP	12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	ZNF611	Q8N823	705 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	LRRC75A	Q8NAA5	344 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	MBD6	Q96DN6	1003 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	ASB9	Q96DX5	294 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	RADIL	Q96JH8	1075 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	LRGUK	Q96M69	825 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	ALPK1	Q96QP1	1244 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	FOXC2	Q99958	501 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	MRPL13	Q9BYD1	178 aa	Known RBP	12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	TXNIP	Q9H3M7	391 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	CISD1	Q9NZ45	108 aa	Known RBP	12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	MGAT4B	Q9UQ53	548 aa		12.52	□□□□□ -0.41
PTPN6-205	ENST00000534900	ABCA4	P78363	2273 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	MYO9A	B2RTY4	2548 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	IGHV1-18	A0A0C4DH31	117 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	SHISA9	B4DS77	424 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	DHH	O43323	396 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	STAMBP	O95630	424 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	ZNF26	P17031	533 aa	Predicted RBP	12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	RPL4	P36578	427 aa	Known RBP	12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	ACVR1B	P36896	505 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	RPL27	P61353	136 aa	Known RBP	12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	ERVK-25	P63136	954 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	SPOCK1	Q08629	439 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	TRAP1	Q12931	704 aa	Known RBP	12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	TOP3A	Q13472	1001 aa	Predicted RBP	12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	HIST3H3	Q16695	136 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	PGM2L1	Q6PCE3	622 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	ZER1	Q7Z7L7	766 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	DEPDC4	Q8N2C3	294 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	HDAC2	Q92769	488 aa	Known RBP	12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	PIGT	Q969N2	578 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	MCHR2	Q969V1	340 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	CCL19	Q99731	98 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	GPA33	Q99795	319 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	FOXB1	Q99853	325 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	TMCC3	Q9ULS5	477 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	AURKC	Q9UQB9	309 aa		12.51	□□□□□ -0.41
PTPN6-205	ENST00000534900	CCDC168	Q8NDH2	2452 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	ANKRD17	O75179	2603 aa	Known RBP	12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	ZNF503-AS2	A6NEH8	195 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	UNC119B	A6NIH7	251 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	NPIPB13	A6NJU9	1138 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	NPIPB4	C9JG80	1138 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	GSC2	O15499	205 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	DNAJC8	O75937	253 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	HLA-H	P01893	362 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	B4GALT1	P15291	398 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	CBR1	P16152	277 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	PAX7	P23759	505 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	LIMS1	P48059	325 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	CHRNB3	Q05901	458 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	PIGF	Q07326	219 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	TAF11	Q15544	211 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	FAM98B	Q52LJ0	330 aa	Known RBP	12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	ZNF627	Q7L945	461 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	HDDC2	Q7Z4H3	204 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	CCDC36	Q8IYA8	594 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	SMAP2	Q8WU79	429 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	FBXW5	Q969U6	566 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	SLC38A2	Q96QD8	506 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	TSPAN32	Q96QS1	320 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	MAGIX	Q9H6Y5	334 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	KRCC1	Q9NPI7	259 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	BEX4	Q9NWD9	120 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	POU2F3	Q9UKI9	436 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	LAMP3	Q9UQV4	416 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	ATP23	Q9Y6H3	246 aa		12.5	□□□□□ -0.41
PTPN6-205	ENST00000534900	CENPBD1	B2RD01	187 aa		12.49	□□□□□ -0.41
PTPN6-205	ENST00000534900		E7EQL1	145 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms