RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 C1QTNF6Q9BXI9 259 aa12.29□□□□□ -0.44
VPS11-205ENST00000534551 OR10A4Q9H209 315 aa12.29□□□□□ -0.44
VPS11-205ENST00000534551 CLEC4MQ9H2X3 399 aaPredicted RBP12.29□□□□□ -0.44
VPS11-205ENST00000534551 LIME1Q9H400 295 aa12.29□□□□□ -0.44
VPS11-205ENST00000534551 REEP1Q9H902 201 aa12.29□□□□□ -0.44
VPS11-205ENST00000534551 RASSF1Q9NS23 344 aa12.29□□□□□ -0.44
VPS11-205ENST00000534551 ZNF226Q9NYT6 803 aa12.29□□□□□ -0.44
VPS11-205ENST00000534551 TMCC3Q9ULS5 477 aa12.29□□□□□ -0.44
VPS11-205ENST00000534551 SLC25A15Q9Y619 301 aa12.29□□□□□ -0.44
VPS11-205ENST00000534551 CSMD1Q96PZ7 3565 aa12.29□□□□□ -0.44
VPS11-205ENST00000534551 PDZD2O15018 2839 aa12.29□□□□□ -0.44
VPS11-205ENST00000534551 ROS1P08922 2347 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 FAM221AA4D161 298 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 CASKO14936 926 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 SLC2A10O95528 541 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 PPP1R3DO95685 299 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 CST1P01037 141 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 IGFBP1P08833 259 aaPredicted RBP12.28□□□□□ -0.44
VPS11-205ENST00000534551 B4GALT1P15291 398 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 PPP3CBP16298 524 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 RPL4P36578 427 aaKnown RBP12.28□□□□□ -0.44
VPS11-205ENST00000534551 DAP3P51398 398 aaKnown RBP12.28□□□□□ -0.44
VPS11-205ENST00000534551 CLRN1P58418 232 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 SMIM11AP58511 58 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 PPA1Q15181 289 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 ZBED5Q49AG3 693 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 MESTQ5EB52 335 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 TIMM23BQ5SRD1 257 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 ZNF770Q6IQ21 691 aaPredicted RBP12.28□□□□□ -0.44
VPS11-205ENST00000534551 CDC20BQ86Y33 519 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 CDK20Q8IZL9 346 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 C1orf162Q8NEQ5 155 aaPredicted RBP12.28□□□□□ -0.44
VPS11-205ENST00000534551 ZNF519Q8TB69 540 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 ZNF566Q969W8 418 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 SLC25A44Q96H78 314 aaPredicted RBP12.28□□□□□ -0.44
VPS11-205ENST00000534551 Q96M85 177 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 MUS81Q96NY9 551 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 HDHD5Q9BXW7 423 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 TXNIPQ9H3M7 391 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 EGLN3Q9H6Z9 239 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 SEC61A2Q9H9S3 476 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 NOX3Q9HBY0 568 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 SLC17A5Q9NRA2 495 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 GLTPQ9NZD2 209 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 ZNF346Q9UL40 294 aaKnown RBP12.28□□□□□ -0.44
VPS11-205ENST00000534551 ANKRD17O75179 2603 aaKnown RBP12.28□□□□□ -0.44
VPS11-205ENST00000534551 AKAP9Q99996 3911 aa12.28□□□□□ -0.44
VPS11-205ENST00000534551 TEX13CA0A0J9YWL9 993 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 PTP4A3O75365 173 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 CIB2O75838 187 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 KRT36O76013 467 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 CCNB2O95067 398 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 SOX14O95416 240 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 IGHG1P01857 330 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 ACADSP16219 412 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 FPR3P25089 353 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 ACVR1BP36896 505 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 GSSP48637 474 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 ZNF83P51522 516 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 HMGA2P52926 109 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 RPL27P61353 136 aaKnown RBP12.27□□□□□ -0.45
VPS11-205ENST00000534551 CD47Q08722 323 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 C1orf94Q6P1W5 598 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 LRFN4Q6PJG9 635 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 ZNF620Q6ZNG0 422 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 FAM122BQ7Z309 247 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 MYPOPQ86VE0 399 aaPredicted RBP12.27□□□□□ -0.45
VPS11-205ENST00000534551 KBTBD8Q8NFY9 601 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 OR10G2Q8NGC3 310 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 OR8D4Q8NGM9 314 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 BCL2L2Q92843 193 aaPredicted RBP12.27□□□□□ -0.45
VPS11-205ENST00000534551 NEUROG1Q92886 237 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 GTPBP3Q969Y2 492 aaKnown RBP12.27□□□□□ -0.45
VPS11-205ENST00000534551 NMD3Q96D46 503 aaKnown RBP12.27□□□□□ -0.45
VPS11-205ENST00000534551 LURAP1Q96LR2 239 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 SAMD8Q96LT4 415 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 ADAD1Q96M93 576 aaKnown RBP12.27□□□□□ -0.45
VPS11-205ENST00000534551 MRPL13Q9BYD1 178 aaKnown RBP12.27□□□□□ -0.45
VPS11-205ENST00000534551 PLA2G12AQ9BZM1 189 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 OR52D1Q9H346 318 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 SLC24A3Q9HC58 644 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 KRCC1Q9NPI7 259 aaPredicted RBP12.27□□□□□ -0.45
VPS11-205ENST00000534551 CCM2LQ9NUG4 571 aaPredicted RBP12.27□□□□□ -0.45
VPS11-205ENST00000534551 MAGED1Q9Y5V3 778 aaPredicted RBP12.27□□□□□ -0.45
VPS11-205ENST00000534551 DSCAMO60469 2012 aa12.27□□□□□ -0.45
VPS11-205ENST00000534551 HTR3EA5X5Y0 456 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 OR6C65A6NJZ3 312 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 RPL36A-HNRNPH2H7BZ11 118 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 M0R1B8 84 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 SOCS2O14508 198 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 NDUFB2O95178 105 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 GASTP01350 101 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 CD14P08571 375 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 CELA3BP08861 270 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 QDPRP09417 244 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 BSPH1Q075Z2 132 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 KRR1Q13601 381 aaKnown RBP12.26□□□□□ -0.45
VPS11-205ENST00000534551 KPNB1Q14974 876 aaKnown RBP12.26□□□□□ -0.45
VPS11-205ENST00000534551 OTPQ5XKR4 325 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 ADAM5Q6NVV9 412 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms