RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	PIGU	Q9H490	435 aa		5.19	□□□□□ -1.58
PICALM-223	ENST00000534412	ZNF442	Q9H7R0	627 aa		5.19	□□□□□ -1.58
PICALM-223	ENST00000534412	SLC7A10	Q9NS82	523 aa		5.19	□□□□□ -1.58
PICALM-223	ENST00000534412	ACSS1	Q9NUB1	689 aa	Predicted RBP	5.19	□□□□□ -1.58
PICALM-223	ENST00000534412	HIF1AN	Q9NWT6	349 aa		5.19	□□□□□ -1.58
PICALM-223	ENST00000534412	ARMCX1	Q9P291	453 aa		5.19	□□□□□ -1.58
PICALM-223	ENST00000534412	CRNN	Q9UBG3	495 aa	Predicted RBP	5.19	□□□□□ -1.58
PICALM-223	ENST00000534412	DTNA	Q9Y4J8	743 aa		5.19	□□□□□ -1.58
PICALM-223	ENST00000534412	CCL27	Q9Y4X3	112 aa		5.19	□□□□□ -1.58
PICALM-223	ENST00000534412	POLR3H	Q9Y535	204 aa	Predicted RBP	5.19	□□□□□ -1.58
PICALM-223	ENST00000534412	NOTCH1	P46531	2555 aa		5.19	□□□□□ -1.58
PICALM-223	ENST00000534412	IGKV2D-30	A0A075B6S6	120 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	RAD51C	O43502	376 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	IGLV1-44	P01699	117 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	CRYAA	P02489	173 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	HMGN2	P05204	90 aa	Known RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	ANXA2	P07355	339 aa	Known RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	ERCC1	P07992	297 aa	Predicted RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	TMEM225B	P0DP42	221 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	DDX5	P17844	614 aa	Known RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	BTF3	P20290	206 aa	Known RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	IMPDH1	P20839	514 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	ATP6V1C1	P21283	382 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	PRPH2	P23942	346 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	SLC1A3	P43003	542 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	ATP12A	P54707	1039 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	PLTP	P55058	493 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	FOXA1	P55317	472 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	NAAA	Q02083	359 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	BTK	Q06187	659 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	UAP1	Q16222	522 aa	Predicted RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	MIDN	Q504T8	468 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	HIKESHI	Q53FT3	197 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	DCST2	Q5T1A1	773 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	TSPO2	Q5TGU0	170 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	RUSC1-AS1	Q66K80	236 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	ANKRD26P1	Q6NSI1	321 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	CDC73	Q6P1J9	531 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	SHQ1	Q6PI26	577 aa	Known RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	KLHL24	Q6TFL4	600 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	LRIG3	Q6UXM1	1119 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	CASP12	Q6UXS9	341 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	SZRD1	Q7Z422	152 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	SVOPL	Q8N434	492 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	WDR60	Q8WVS4	1066 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	CDS1	Q92903	461 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	ZNF566	Q969W8	418 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	MRPL24	Q96A35	216 aa	Known RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	TMEM45B	Q96B21	275 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	ZHX1-C8orf76	Q96EF9	292 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	L3HYPDH	Q96EM0	354 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	ARL5B	Q96KC2	179 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	ZNF317	Q96PQ6	595 aa	Predicted RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	DOK1	Q99704	481 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	CCT7	Q99832	543 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	CCDC106	Q9BWC9	280 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	NMUR2	Q9GZQ4	415 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	NUAK2	Q9H093	628 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	MOV10	Q9HCE1	1003 aa	Known RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	ESM1	Q9NQ30	184 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	SERINC1	Q9NRX5	453 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	SIRT3	Q9NTG7	399 aa	Predicted RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	CHRNA9	Q9UGM1	479 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	SLC9A8	Q9Y2E8	581 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	LRCH1	Q9Y2L9	728 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	HDGFL3	Q9Y3E1	203 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	GRIP1	Q9Y3R0	1128 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	TIMM22	Q9Y584	194 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	PCDHGB1	Q9Y5G3	927 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	FLVCR1	Q9Y5Y0	555 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	SPIN1	Q9Y657	262 aa	Predicted RBP	5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	SAR1B	Q9Y6B6	198 aa		5.18	□□□□□ -1.58
PICALM-223	ENST00000534412	NBEAL2	Q6ZNJ1	2754 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	CMYA5	Q8N3K9	4069 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	ARPC4-TTLL3	A0A0A6YYG9	625 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	TMEM129	A0AVI4	362 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412		H3BQF6	201 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	GTPBP1	O00178	669 aa	Known RBP	5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	ZSCAN12	O43309	604 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	PNP	P00491	289 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	IGKV3-15	P01624	115 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	TF	P02787	698 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	CECR9	P0C854	216 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	SDC1	P18827	310 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	FKBP2	P26885	142 aa	Known RBP	5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	PHB	P35232	272 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	APOBEC1	P41238	236 aa	Known RBP	5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	PAFAH1B1	P43034	410 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	MAGEA8	P43361	318 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	CLK1	P49759	484 aa	Known RBP	5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	SERPINB9	P50453	376 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	CCR4	P51679	360 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	PRKAA2	P54646	552 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	LINC00205	P59089	165 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	UBA52	P62987	128 aa	Known RBP	5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	MERTK	Q12866	999 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	LASP1	Q14847	261 aa	Known RBP	5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	SLC17A1	Q14916	467 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	TBRG1	Q3YBR2	411 aa		5.17	□□□□□ -1.58
PICALM-223	ENST00000534412	C9orf135	Q5VTT2	229 aa		5.17	□□□□□ -1.58

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