RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 UBE2NP61088 152 aaKnown RBP8.32□□□□□ -1.08
SSBP3-215ENST00000533946 TGFBR3Q03167 851 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 MAD2L1BPQ15013 274 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-215ENST00000533946 ETFDHQ16134 617 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 ALKBH6Q3KRA9 238 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 TTC33Q6PID6 262 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-215ENST00000533946 PIK3C3Q8NEB9 887 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 OR2T12Q8NG77 320 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 OR6N1Q8NGY5 312 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 OR6S1Q8NH40 331 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 MAGEE2Q8TD90 523 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-215ENST00000533946 C10orf105Q8TEF2 133 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 HDAC2Q92769 488 aaKnown RBP8.32□□□□□ -1.08
SSBP3-215ENST00000533946 NMD3Q96D46 503 aaKnown RBP8.32□□□□□ -1.08
SSBP3-215ENST00000533946 HS6ST2Q96MM7 605 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 FOXN4Q96NZ1 517 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 USB1Q9BQ65 265 aaKnown RBP8.32□□□□□ -1.08
SSBP3-215ENST00000533946 SIKE1Q9BRV8 207 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 ASPNQ9BXN1 380 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 ALG2Q9H553 416 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 NANSQ9NR45 359 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 EGFL7Q9UHF1 273 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 MGAT4BQ9UQ53 548 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 UGT2A1Q9Y4X1 527 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 TRAV27A0A087WT01 109 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 IGHV4-61A0A0C4DH41 118 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 ELOVL7A1L3X0 281 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 OR6C65A6NJZ3 312 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 H7C1C5 153 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 CXCR6O00574 342 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 CDC42EP2O14613 210 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 TRMUO75648 421 aaKnown RBP8.31□□□□□ -1.08
SSBP3-215ENST00000533946 OR7A10O76100 309 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 WNT11O96014 354 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 MT-ND1P03886 318 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 QDPRP09417 244 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 TSPAN19P0C672 248 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 UMPSP11172 480 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF35P13682 527 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 SERPINF1P36955 418 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 PTDSS1P48651 473 aaKnown RBP8.31□□□□□ -1.08
SSBP3-215ENST00000533946 CSNK1A1P48729 337 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 NUDT6P53370 316 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 LCN6P62502 163 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 ZP4Q12836 540 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 COQ5Q5HYK3 327 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 ARMC4Q5T2S8 1044 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 SWT1Q5T5J6 900 aaKnown RBP8.31□□□□□ -1.08
SSBP3-215ENST00000533946 IL17RELQ6ZVW7 336 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 LRRC75AQ8NAA5 344 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 TMEM239Q8WW34 195 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 ASB10Q8WXI3 467 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 PROX1Q92786 737 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 MCHR2Q969V1 340 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 TRMT61AQ96FX7 289 aaKnown RBP8.31□□□□□ -1.08
SSBP3-215ENST00000533946 TNFRSF13CQ96RJ3 184 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 EPYCQ99645 322 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 DOK1Q99704 481 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 GPA33Q99795 319 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 FOXB1Q99853 325 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 VRK1Q99986 396 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-215ENST00000533946 MRPL13Q9BYD1 178 aaKnown RBP8.31□□□□□ -1.08
SSBP3-215ENST00000533946 MRPL37Q9BZE1 423 aaKnown RBP8.31□□□□□ -1.08
SSBP3-215ENST00000533946 ULBP2Q9BZM5 246 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 GRIP2Q9C0E4 1043 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 TPK1Q9H3S4 243 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 FKRPQ9H9S5 495 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 ARL8BQ9NVJ2 186 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 GLTPQ9NZD2 209 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 CORINQ9Y5Q5 1042 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 NOX1Q9Y5S8 564 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 V9GYQ6 96 aa8.31□□□□□ -1.08
SSBP3-215ENST00000533946 LRP5LA4QPB2 252 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF726A6NNF4 738 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 BBIP1A8MTZ0 92 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 H7C417 338 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 WNT9BO14905 357 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 OR5F1O95221 314 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF682O95780 498 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 CLPTM1O96005 669 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 MT-ATP6P00846 226 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 SERPINA1P01009 418 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 ALDH3B1P43353 468 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 GPR4P46093 362 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 NUDT2P50583 147 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 RAB1AP62820 205 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 SELENOWP63302 87 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 SNTB2Q13425 540 aaKnown RBP8.3□□□□□ -1.08
SSBP3-215ENST00000533946 TOP3AQ13472 1001 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-215ENST00000533946 RAB35Q15286 201 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 SEC23BQ15437 767 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 TRIP10Q15642 601 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 CARTPTQ16568 116 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 HIST3H3Q16695 136 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 IQCCQ4KMZ1 466 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 SPRNQ5BIV9 151 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 INTS11Q5TA45 600 aaKnown RBP8.3□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF544Q6NX49 715 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF627Q7L945 461 aa8.3□□□□□ -1.08
SSBP3-215ENST00000533946 SPATA21Q7Z572 469 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms