RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 CXorf58Q96LI9 332 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 TBX5Q99593 518 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 VDAC3Q9Y277 283 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 A0A087WZY1 265 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 C13orf42A0A1B0GVH6 325 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 POM121CA8CG34 1229 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 ZNF587BE7ETH6 402 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 E9PQ18 207 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 HRGP04196 525 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 CD74P04233 296 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 FOLR2P14207 255 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 SNCAP37840 140 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 FLT3LGP49771 235 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 MMP16P51512 607 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 CAV2P51636 162 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 LCN6P62502 163 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 UBE2IP63279 158 aaKnown RBP3.72□□□□□ -1.81
SOX6-217ENST00000533870 BAXQ07812 192 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 USF2Q15853 346 aaPredicted RBP3.72□□□□□ -1.81
SOX6-217ENST00000533870 LAMTOR1Q6IAA8 161 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 POMZP3Q6PJE2 187 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 DPPA3Q6W0C5 159 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 STAC2Q6ZMT1 411 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 ABI3BPQ7Z7G0 1075 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 CCDC116Q8IYX3 515 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 FOXJ1Q92949 421 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 FBXW5Q969U6 566 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 ZMYND19Q96E35 227 aaPredicted RBP3.72□□□□□ -1.81
SOX6-217ENST00000533870 PELI1Q96FA3 418 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 SENP5Q96HI0 755 aaPredicted RBP3.72□□□□□ -1.81
SOX6-217ENST00000533870 NOL4LQ96MY1 436 aaPredicted RBP3.72□□□□□ -1.81
SOX6-217ENST00000533870 HIST1H2AAQ96QV6 131 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 TMEM59Q9BXS4 323 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 B3GNT4Q9C0J1 378 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 BEX1Q9HBH7 125 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 SLC2A8Q9NY64 477 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 COQ3Q9NZJ6 369 aa3.72□□□□□ -1.81
SOX6-217ENST00000533870 NPIPB13A6NJU9 1138 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 NPIPB4C9JG80 1138 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 ZNF878C9JN71 531 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 H7BYZ3 331 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 PLPP1O14494 284 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 MBP02144 154 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 OPN1MWP04001 364 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 C1SP09871 688 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 OR5AC1P0C628 307 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 OPN1MW2P0DN77 364 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 OPN1MW3P0DN78 364 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 ADH5P11766 374 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 SSTR4P31391 388 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 CTXN1P60606 82 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 RPL23AP62750 156 aaKnown RBP3.71□□□□□ -1.81
SOX6-217ENST00000533870 SRSF4Q08170 494 aaKnown RBP3.71□□□□□ -1.81
SOX6-217ENST00000533870 SPOCK1Q08629 439 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 CD300CQ08708 224 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 ZNF385BQ569K4 471 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 PSMG4Q5JS54 123 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 C9orf131Q5VYM1 1079 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 CYB5R2Q6BCY4 276 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 Q6ZNB5 142 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 TMEM99Q8N816 258 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 OR2L3Q8NG85 312 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 OR2A12Q8NGT7 310 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 WDR48Q8TAF3 677 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 ST8SIA1Q92185 356 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 MS4A6EQ96DS6 147 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 LRRC3BQ96PB8 259 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 BARHL1Q9BZE3 327 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 RPS10P5Q9NQ39 176 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 PRTFDC1Q9NRG1 225 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 ING1Q9UK53 422 aaPredicted RBP3.71□□□□□ -1.81
SOX6-217ENST00000533870 RPH3AQ9Y2J0 694 aaPredicted RBP3.71□□□□□ -1.81
SOX6-217ENST00000533870 GPR52Q9Y2T5 361 aa3.71□□□□□ -1.81
SOX6-217ENST00000533870 PCDHGA9Q9Y5G4 932 aaKnown RBP3.71□□□□□ -1.81
SOX6-217ENST00000533870 DDNO94850 711 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 IL2RAP01589 272 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 KLKB1P03952 638 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 CD63P08962 238 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 THEGLP0DJG4 465 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 CT45A8P0DMV1 189 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 CT45A9P0DMV2 189 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 F3P13726 295 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ALDH3B1P43353 468 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 DHPSP49366 369 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 HBG1P69891 147 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 HBG2P69892 147 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 MAT1AQ00266 395 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 GPNMBQ14956 572 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 SOWAHCQ53LP3 525 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 CT45A2Q5DJT8 189 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ZNF425Q6IV72 752 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 DOK3Q7L591 496 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 COMMD2Q86X83 199 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ARIH2OSQ8N7S6 290 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 OR10R2Q8NGX6 335 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 OR8U1Q8NH10 309 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 NT5CQ8TCD5 201 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 SCGB1C1Q8TD33 95 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 PP6455Q8WZ26 134 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 TMEM18Q96B42 140 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms