RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 WDR88Q6ZMY6 472 aa15.79■□□□□ 0.12
SSSCA1-206ENST00000531405 PXKQ7Z7A4 578 aa15.79■□□□□ 0.12
SSSCA1-206ENST00000531405 LRRC37BQ96QE4 947 aa15.79■□□□□ 0.12
SSSCA1-206ENST00000531405 NKIRAS1Q9NYS0 192 aa15.79■□□□□ 0.12
SSSCA1-206ENST00000531405 CCDC167Q9P0B6 97 aa15.79■□□□□ 0.12
SSSCA1-206ENST00000531405 M0R3H8 397 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 PPIHO43447 177 aaKnown RBP15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 MSMBP08118 114 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 ADORA3P0DMS8 318 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 GAAP10253 952 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 MAGEB1P43366 347 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 BLOC1S3Q6QNY0 202 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 SNX32Q86XE0 403 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 ARMC8Q8IUR7 673 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 PAQR4Q8N4S7 273 aaPredicted RBP15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 SMYD1Q8NB12 490 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 OR5J2Q8NH18 312 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 SPDL1Q96EA4 605 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 TMEM43Q9BTV4 400 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 PLA2G12AQ9BZM1 189 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 OR51B6Q9H340 312 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 DENND2DQ9H6A0 471 aaPredicted RBP15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 SLC7A8Q9UHI5 535 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 SLC13A4Q9UKG4 626 aa15.78■□□□□ 0.12
SSSCA1-206ENST00000531405 TANC2Q9HCD6 1990 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 TRBV5-3A0A0A0MS03 114 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 PRORSD1PA6NEY8 169 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 RP2O75695 350 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 CLPTM1O96005 669 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 TFP02787 698 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 FAM157BP0CG42 384 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 CCL2P13500 99 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 SLC6A2P23975 617 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 MRPL19P49406 292 aaKnown RBP15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 SLC18A1P54219 525 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 LMO4P61968 165 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 RUNX1T1Q06455 604 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 MELKQ14680 651 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 REP15Q6BDI9 236 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 SHQ1Q6PI26 577 aaKnown RBP15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 DEF8Q6ZN54 512 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 RANBP3LQ86VV4 465 aaPredicted RBP15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 TMEM54Q969K7 222 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 TSPAN32Q96QS1 320 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 ZNF607Q96SK3 696 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 SH3GL3Q99963 347 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 EBF4Q9BQW3 602 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 TMEM38AQ9H6F2 299 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 SLC52A3Q9NQ40 469 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 TCF7L2Q9NQB0 619 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 GLTPQ9NZD2 209 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 GRIP1Q9Y3R0 1128 aa15.77■□□□□ 0.12
SSSCA1-206ENST00000531405 MEGF8Q7Z7M0 2845 aa15.77■□□□□ 0.11
SSSCA1-206ENST00000531405 POLR3GO15318 223 aaPredicted RBP15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 CDC14BO60729 498 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 SERPINA5P05154 406 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 PPIBP23284 216 aaKnown RBP15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 LSP1P33241 339 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 TMEM33P57088 247 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 ERVS71-1P61550 626 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 NKPD1Q17RQ9 610 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 SWT1Q5T5J6 900 aaKnown RBP15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 RGS7BPQ6MZT1 257 aaPredicted RBP15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 FAHD2BQ6P2I3 314 aaPredicted RBP15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 SLC35D2Q76EJ3 337 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 PIWIL3Q7Z3Z3 882 aaKnown RBP15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 SLC22A24Q8N4F4 322 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 OR51F2Q8NH61 342 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 FAHD2AQ96GK7 314 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 MCHR1Q99705 422 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 TAAR3PQ9P1P4 343 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 FBXL3Q9UKT7 428 aa15.76■□□□□ 0.11
SSSCA1-206ENST00000531405 A0A0A6YYJ9 748 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 CPSF4LA6NMK7 179 aaKnown RBP15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 ZNF500O60304 480 aaPredicted RBP15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 SERPINB7O75635 380 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 MFN2O95140 757 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 OR6A2O95222 327 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 CH25HO95992 272 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 MT-ATP6P00846 226 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 OPN1SWP03999 348 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 GPX2P18283 190 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 IDH3AP50213 366 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 CCL8P80075 99 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 NPTX1Q15818 432 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 AVPI1Q5T686 147 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 LRFN4Q6PJG9 635 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 LINC00114Q6XXX2 140 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 C1orf229Q6ZS94 237 aaPredicted RBP15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 LRRC17Q8N6Y2 441 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 HIPK4Q8NE63 616 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 SLC30A7Q8NEW0 376 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 BHLHE22Q8NFJ8 381 aaPredicted RBP15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 OR6X1Q8NH79 312 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 TLCD1Q96CP7 247 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 ARHGDIGQ99819 225 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 CPPED1Q9BRF8 314 aaPredicted RBP15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 ZNF416Q9BWM5 594 aa15.75■□□□□ 0.11
SSSCA1-206ENST00000531405 ZNF385DQ9H6B1 395 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms