RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 OR4C45A6NMZ5 311 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 ATP6V1G2-DDX39BF2Z307 99 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 NDUFB6O95139 128 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 LDOC1O95751 146 aaPredicted RBP17.48■□□□□ 0.39
VPS28-213ENST00000530983 RPS27P42677 84 aaKnown RBP17.48■□□□□ 0.39
VPS28-213ENST00000530983 MAP2K6P52564 334 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 RPL18Q07020 188 aaKnown RBP17.48■□□□□ 0.39
VPS28-213ENST00000530983 PHOSPHO1Q8TCT1 267 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 PMEPA1Q969W9 287 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 KTI12Q96EK9 354 aaPredicted RBP17.48■□□□□ 0.39
VPS28-213ENST00000530983 TSPAN32Q96QS1 320 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 C1QTNF6Q9BXI9 259 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 PPA2Q9H2U2 334 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 RDH8Q9NYR8 311 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 TMEM184BQ9Y519 407 aaPredicted RBP17.48■□□□□ 0.39
VPS28-213ENST00000530983 ALPK2Q86TB3 2170 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 SPTY2D1-AS1A0A0U1RR47 76 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 A0A1W2PPL8 197 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 TUBAL3A6NHL2 446 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 C10orf142B7Z368 130 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 PRAMEF26H0Y7S4 382 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 AKR7A3O95154 331 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 NSA2O95478 260 aaKnown RBP17.48■□□□□ 0.39
VPS28-213ENST00000530983 HRGP04196 525 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 MAS1P04201 325 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 ALDOBP05062 364 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 CSRP1P21291 193 aaKnown RBP17.48■□□□□ 0.39
VPS28-213ENST00000530983 ADH7P40394 386 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 MECP2P51608 486 aaKnown RBP17.48■□□□□ 0.39
VPS28-213ENST00000530983 SKP1P63208 163 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 DHODHQ02127 395 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 FZD2Q14332 565 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 ZNF626Q68DY1 528 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 CHMP1BQ7LBR1 199 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 PARGQ86W56 976 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 OR51A4Q8NGJ6 313 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 KLHL15Q96M94 604 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 WDR76Q9H967 626 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 UBQLN4Q9NRR5 601 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 GRHPRQ9UBQ7 328 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 LAMP5Q9UJQ1 280 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 IKZF2Q9UKS7 526 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 MAB21L2Q9Y586 359 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 CACNA1IQ9P0X4 2223 aa17.48■□□□□ 0.39
VPS28-213ENST00000530983 TRBV5-7A0A0A0MS05 114 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 H0YC42 278 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 SRPX2O60687 465 aaPredicted RBP17.47■□□□□ 0.39
VPS28-213ENST00000530983 GLSO94925 669 aaPredicted RBP17.47■□□□□ 0.39
VPS28-213ENST00000530983 ITPKBP27987 946 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 MRPS21P82921 87 aaKnown RBP17.47■□□□□ 0.39
VPS28-213ENST00000530983 GRM7Q14831 915 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 TMEM81Q6P7N7 255 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 OR6N2Q8NGY6 317 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 OR2G2Q8NGZ5 317 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 ZDHHC1Q8WTX9 485 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 PIAS3Q9Y6X2 628 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 PLSCR5A0PG75 271 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 ANXA2P2A6NMY6 339 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 B4DGG1 531 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 CREBL2O60519 120 aaPredicted RBP17.47■□□□□ 0.39
VPS28-213ENST00000530983 ZNF254O75437 659 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 ANXA2P07355 339 aaKnown RBP17.47■□□□□ 0.39
VPS28-213ENST00000530983 GIPP09681 153 aaPredicted RBP17.47■□□□□ 0.39
VPS28-213ENST00000530983 HPGDP15428 266 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 DMWDQ09019 674 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 LRRN1Q6UXK5 716 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 DPY19L4Q7Z388 723 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 KANSL1Q7Z3B3 1105 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 MEIOBQ8N635 442 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 ZBTB44Q8NCP5 570 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 TMEM106AQ96A25 262 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 MMABQ96EY8 250 aaPredicted RBP17.47■□□□□ 0.39
VPS28-213ENST00000530983 WDR89Q96FK6 387 aaPredicted RBP17.47■□□□□ 0.39
VPS28-213ENST00000530983 MAP3K3Q99759 626 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 PRODH2Q9UF12 536 aa17.47■□□□□ 0.39
VPS28-213ENST00000530983 VCANP13611 3396 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 H3BSH0 61 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 ACSM4P0C7M7 580 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 CTSEP14091 401 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 CXCL2P19875 107 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 ALOX5APP20292 161 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 HSD17B7P56937 341 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 OPCMLQ14982 345 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 CSRP2Q16527 193 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 GLB1L2Q8IW92 636 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 ZNF321PQ8N8H1 164 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 ADAMTS18Q8TE60 1221 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 C15orf40Q8WUR7 153 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 SEMA4CQ9C0C4 833 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 CACNA1CQ13936 2221 aa17.46■□□□□ 0.39
VPS28-213ENST00000530983 OR2M5A3KFT3 312 aa17.46■□□□□ 0.38
VPS28-213ENST00000530983 OR2A4O95047 310 aa17.46■□□□□ 0.38
VPS28-213ENST00000530983 GPANK1O95872 356 aa17.46■□□□□ 0.38
VPS28-213ENST00000530983 IL5P05113 134 aa17.46■□□□□ 0.38
VPS28-213ENST00000530983 ATXN8OSP0DMR3 200 aa17.46■□□□□ 0.38
VPS28-213ENST00000530983 DRD1P21728 446 aa17.46■□□□□ 0.38
VPS28-213ENST00000530983 PSMA6P60900 246 aaKnown RBP17.46■□□□□ 0.38
VPS28-213ENST00000530983 HTR4Q13639 388 aa17.46■□□□□ 0.38
VPS28-213ENST00000530983 ODF4Q2M2E3 257 aa17.46■□□□□ 0.38
VPS28-213ENST00000530983 MAMSTRQ6ZN01 415 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms