RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 FANCFQ9NPI8 374 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 INIPQ9NRY2 104 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ZNF275Q9NSD4 429 aaPredicted RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 MRPL39Q9NYK5 338 aaKnown RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 AKAP7Q9P0M2 348 aaPredicted RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 COPZ2Q9P299 210 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 PISDQ9UG56 409 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 TBC1D24Q9ULP9 559 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ZNF281Q9Y2X9 895 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 YARS2Q9Y2Z4 477 aaKnown RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 ADAM18Q9Y3Q7 739 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 KNL1Q8NG31 2342 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ABCA7Q8IZY2 2146 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ADAMTS9Q9P2N4 1935 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 EXPH5Q8NEV8 1989 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 PCDH15Q96QU1 1955 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 SPTBP11277 2137 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 TMED7-TICAM2A0A0A6YYA0 188 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 LY6G6EA0A0G2JKS1 128 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 IGHV5-10-1A0A0J9YXX1 117 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 A0A1W2PQ72 361 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 A0A1W2PRG6 482 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 OR6C68A6NDL8 312 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 TMEM212A6NML5 194 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 A8MUA0 341 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 BLOC1S5-TXNDC5H3BN57 136 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 CTDSPLO15194 276 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 LAMTOR5O43504 91 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 SUSD5O60279 629 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 ZFAND5O76080 213 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 UBL3O95164 117 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 OR6A2O95222 327 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 NUDT14O95848 222 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 IGHEP01854 428 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 TFP02787 698 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 KRT8P05787 483 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 GP1BAP07359 652 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 SYPP08247 313 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 MRPL3P09001 348 aaKnown RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 CSF3P09919 207 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 RAB40ALP0C0E4 278 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 CLEC2LP0C7M8 214 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 ZNF883P0CG24 379 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 NR2C1P13056 603 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 HOXA5P20719 270 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 EDNRAP25101 427 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 MST1P26927 711 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 ITPKBP27987 946 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 CRABP1P29762 137 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 AQP2P41181 271 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 CDKN2AP42771 156 aaKnown RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 PITPNBP48739 271 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 INPP1P49441 399 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 DAP3P51398 398 aaKnown RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 CCR9P51686 369 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 CAPZA1P52907 286 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 EMP2P54851 167 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 RAB25P57735 213 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 OR2B6P58173 313 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 RPL27P61353 136 aaKnown RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 ERVK-25P63136 954 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 SLC3A1Q07837 685 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 RIPPLY1Q0D2K3 151 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 QPRTQ15274 297 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 TOMM34Q15785 309 aaPredicted RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 EXT1Q16394 746 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 HLA-BQ31612 363 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 NDUFAF6Q330K2 333 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 C1orf140Q5VVS0 124 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 BICRALQ6AI39 1079 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 KCTD18Q6PI47 426 aaPredicted RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 PAPD4Q6PIY7 484 aaKnown RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 PLET1Q6UQ28 207 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 CBLN3Q6UW01 205 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 CPEB2Q7Z5Q1 589 aaKnown RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 CDC20BQ86Y33 519 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 TIGD4Q8IY51 512 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 UBQLNLQ8IYU4 475 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 RDH10Q8IZV5 341 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 LRRC17Q8N6Y2 441 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 ZNF321PQ8N8H1 164 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 GATSQ8NAP1 163 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 ZBTB8BQ8NAP8 495 aaPredicted RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 APCDD1LQ8NCL9 501 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 DUSP18Q8NEJ0 188 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 IL17RDQ8NFM7 739 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 OR6K6Q8NGW6 343 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 MFSD8Q8NHS3 518 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 ENKURQ8TC29 256 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 SLC25A43Q8WUT9 341 aaPredicted RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 RAB40AQ8WXH6 277 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 HTRA1Q92743 480 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 CLIP3Q96DZ5 547 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 MRGPRX4Q96LA9 322 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 Q96M85 177 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 MOGAT1Q96PD6 335 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 GFM1Q96RP9 751 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms