RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 EMC6Q9BV81 110 aa13.73□□□□□ -0.21
COL16A1-216ENST00000529928 TPT1P8Q9HAU6 139 aa13.73□□□□□ -0.21
COL16A1-216ENST00000529928 NTN4Q9HB63 628 aa13.73□□□□□ -0.21
COL16A1-216ENST00000529928 SLCO1B3Q9NPD5 702 aa13.73□□□□□ -0.21
COL16A1-216ENST00000529928 SLC6A13Q9NSD5 602 aa13.73□□□□□ -0.21
COL16A1-216ENST00000529928 DDX28Q9NUL7 540 aaKnown RBP13.73□□□□□ -0.21
COL16A1-216ENST00000529928 CORINQ9Y5Q5 1042 aa13.73□□□□□ -0.21
COL16A1-216ENST00000529928 USH1CQ9Y6N9 552 aa13.73□□□□□ -0.21
COL16A1-216ENST00000529928 A0A087WUJ7 227 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 SLC22A23A1A5C7 686 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 ZNF726A6NNF4 738 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 C17orf100A8MU93 164 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 CDC14BO60729 498 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 ANP32DO95626 131 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 HPRP00739 348 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 SERPINA5P05154 406 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 IL6P05231 212 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 ZCCHC18P0CG32 403 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 HLA-DOBP13765 273 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 ADRA2CP18825 462 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 CBLP22681 906 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 FPR2P25090 351 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 KLF3P57682 345 aaPredicted RBP13.72□□□□□ -0.21
COL16A1-216ENST00000529928 CCL8P80075 99 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 TEKQ02763 1124 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 CAMK2DQ13557 499 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 RAB39AQ14964 217 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 ALKBH6Q3KRA9 238 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 AVPI1Q5T686 147 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 NXNQ6DKJ4 435 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 HDXQ7Z353 690 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 SCAIQ8N9R8 606 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 DNAJA4Q8WW22 397 aaPredicted RBP13.72□□□□□ -0.21
COL16A1-216ENST00000529928 SLC41A3Q96GZ6 507 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 HINT3Q9NQE9 182 aaKnown RBP13.72□□□□□ -0.21
COL16A1-216ENST00000529928 MED29Q9NX70 200 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 NKIRAS2Q9NYR9 191 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 TAAR3PQ9P1P4 343 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 KLHL14Q9P2G3 628 aa13.72□□□□□ -0.21
COL16A1-216ENST00000529928 IGKV1D-42A0A075B6H8 117 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 IGLV3-9A0A075B6K5 115 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 ENTPD5O75356 428 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 SLC22A3O75751 556 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 PRSS23O95084 383 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 IGHV2-5P01817 119 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 HKR1P10072 659 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 CRYBB2P43320 205 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 MRPL19P49406 292 aaKnown RBP13.71□□□□□ -0.21
COL16A1-216ENST00000529928 ALG10BQ5I7T1 473 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 PIWIL3Q7Z3Z3 882 aaKnown RBP13.71□□□□□ -0.21
COL16A1-216ENST00000529928 ZNF584Q8IVC4 421 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 OR9I1Q8NGQ6 314 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 OR6S1Q8NH40 331 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 EPYCQ99645 322 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 ASPNQ9BXN1 380 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 C7orf69Q9H7B7 122 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 BCL2L10Q9HD36 194 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 SLCO1C1Q9NYB5 712 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 ZIM2Q9NZV7 527 aa13.71□□□□□ -0.21
COL16A1-216ENST00000529928 IGHV1-69-2A0A0G2JMI3 117 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 A0A1B0GWA3 101 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 HMGB1P1B2RPK0 211 aaPredicted RBP13.7□□□□□ -0.22
COL16A1-216ENST00000529928 CLDN25C9JDP6 229 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 UBDO15205 165 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 TGDSO95455 350 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 CLPTM1O96005 669 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 ZNF250P15622 560 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 RAD52P43351 418 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 PUDPQ08623 228 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 ZP4Q12836 540 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 FAM91A1Q658Y4 838 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 ULK3Q6PHR2 472 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 RBMS3Q6XE24 437 aaKnown RBP13.7□□□□□ -0.22
COL16A1-216ENST00000529928 TREML1Q86YW5 311 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 BBS10Q8TAM1 723 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 SYNPRQ8TBG9 265 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 RNF217Q8TC41 542 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 LRRC8CQ8TDW0 803 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 TIMD4Q96H15 378 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 TXNDC15Q96J42 360 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 EBF4Q9BQW3 602 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 RMND5AQ9H871 391 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 WIPI2Q9Y4P8 454 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 PPIAL4AQ9Y536 164 aa13.7□□□□□ -0.22
COL16A1-216ENST00000529928 FSHBP01225 129 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 MT-ND5P03915 603 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 FAM157BP0CG42 384 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 HTR2AP28223 471 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 CSNK1A1P48729 337 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 IDH3AP50213 366 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 RBBP4Q09028 425 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 PMS2P3Q13401 168 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 NHLRC1Q6VVB1 395 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 PXKQ7Z7A4 578 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 RETREG3Q86VR2 466 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 SKA3Q8IX90 412 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 SLC30A7Q8NEW0 376 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 C11orf40Q8WZ69 217 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 RAB1CQ92928 201 aa13.69□□□□□ -0.22
COL16A1-216ENST00000529928 VPS33AQ96AX1 596 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms