RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 EMP2P54851 167 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 OR12D2P58182 307 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 RNF4P78317 190 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 SIRPAP78324 504 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 ASAH1Q13510 395 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 HSPB2Q16082 182 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 ACSM3Q53FZ2 586 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 IDNKQ5T6J7 187 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 ZNF544Q6NX49 715 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 CBLN3Q6UW01 205 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 TMEM91Q6ZNR0 172 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 OVCH1Q7RTY7 1134 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 ANKRD37Q7Z713 158 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 MARCH3Q86UD3 253 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 AKAP14Q86UN6 197 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 LRRC28Q86X40 367 aaPredicted RBP10.63□□□□□ -0.71
USF1-208ENST00000528768 PPP1R3BQ86XI6 285 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 RAB43Q86YS6 212 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 CADM3Q8N126 398 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 ZNF441Q8N8Z8 693 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 OR8K3Q8NH51 312 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 CHAC2Q8WUX2 184 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 THRSPQ92748 146 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 SMIM19Q96E16 107 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 TXNDC15Q96J42 360 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 OR6C1Q96RD1 312 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 SNX18Q96RF0 628 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 LMF1Q96S06 567 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 LPAR4Q99677 370 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 ALG12Q9BV10 488 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 MIXL1Q9H2W2 232 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 C14orf119Q9NWQ9 140 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 TAS2R10Q9NYW0 307 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 GNG8Q9UK08 70 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 NUP210LQ5VU65 1888 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 MED13Q9UHV7 2174 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 TMED7-TICAM2A0A0A6YYA0 188 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 TRBV2A0A0J9YWF9 115 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 WIPF3A6NGB9 483 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 ANKRD61A6NGH8 418 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 FAM47E-STBD1D6RA91 191 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 OIP5O43482 229 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 KRT8P05787 483 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 SLC2A2P11168 524 aaPredicted RBP10.62□□□□□ -0.71
USF1-208ENST00000528768 RAB3BP20337 219 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 MSX1P28360 303 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 UQCRC1P31930 480 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 NAA10P41227 235 aaPredicted RBP10.62□□□□□ -0.71
USF1-208ENST00000528768 EVX1P49640 407 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 GDI2P50395 445 aaKnown RBP10.62□□□□□ -0.71
USF1-208ENST00000528768 MAP2K6P52564 334 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 C17orf67Q0P5P2 114 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 RIN1Q13671 783 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 IL18Q14116 193 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 CDK5R1Q15078 307 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 TP53I3Q53FA7 332 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 FAM69AQ5T7M9 428 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 PRAMEF17Q5VTA0 474 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 HACD4Q5VWC8 232 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 DESI1Q6ICB0 168 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 CNIH2Q6PI25 160 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 APOOLQ6UXV4 268 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 BAIAP2L2Q6UXY1 529 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 TRILQ7L0X0 811 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 GDPD3Q7L5L3 318 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 TIPARPQ7Z3E1 657 aaKnown RBP10.62□□□□□ -0.71
USF1-208ENST00000528768 ESX1Q8N693 406 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 LRRC75AQ8NAA5 344 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 ST8SIA1Q92185 356 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 GHSRQ92847 366 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 Q96M85 177 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 ADAD1Q96M93 576 aaKnown RBP10.62□□□□□ -0.71
USF1-208ENST00000528768 KLHL15Q96M94 604 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 DDOQ99489 341 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 SDHCQ99643 169 aaPredicted RBP10.62□□□□□ -0.71
USF1-208ENST00000528768 MRI1Q9BV20 369 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 MFRPQ9BY79 579 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 SPRY4Q9C004 299 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 SLITRK2Q9H156 845 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 TIGARQ9NQ88 270 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 INIPQ9NRY2 104 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 ABRACLQ9P1F3 81 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 CTSFQ9UBX1 484 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 GPN3Q9UHW5 284 aaPredicted RBP10.62□□□□□ -0.71
USF1-208ENST00000528768 NXT1Q9UKK6 140 aaKnown RBP10.62□□□□□ -0.71
USF1-208ENST00000528768 TMED7Q9Y3B3 224 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 ADAM18Q9Y3Q7 739 aa10.62□□□□□ -0.71
USF1-208ENST00000528768 LOC101059948A0A1B0GTJ6 334 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 CDC14CA4D256 554 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 OR6C68A6NDL8 312 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 ANKUB1A6NFN9 424 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 IDSB3KWA1 339 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 LRRN3E7EW58 273 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 SEC14L5O43304 696 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 SCO2O43819 266 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 SUSD5O60279 629 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 FADS1O60427 444 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 HPGDSO60760 199 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 SERPINI2O75830 405 aa10.61□□□□□ -0.71
USF1-208ENST00000528768 ZFAND5O76080 213 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms