RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 TBC1D23Q9NUY8 699 aa13.48□□□□□ -0.25
PUF60-212ENST00000528320 BEX4Q9NWD9 120 aaPredicted RBP13.48□□□□□ -0.25
PUF60-212ENST00000528320 FREM1Q5H8C1 2179 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 ELOA3DA6NLF2 546 aaPredicted RBP13.47□□□□□ -0.25
PUF60-212ENST00000528320 EFCAB9A8MZ26 197 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 EEF1E1-BLOC1S5C9J1V9 151 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 SEC14L5O43304 696 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 EEF1E1O43324 174 aaKnown RBP13.47□□□□□ -0.25
PUF60-212ENST00000528320 GMFGO60234 142 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 ADAM11O75078 769 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 HRGP04196 525 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 INHBBP09529 407 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 CD53P19397 219 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 FKBP2P26885 142 aaKnown RBP13.47□□□□□ -0.25
PUF60-212ENST00000528320 SLC15A1P46059 708 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 ZNF41P51814 821 aaPredicted RBP13.47□□□□□ -0.25
PUF60-212ENST00000528320 PRPS1P60891 318 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 RPS3AP61247 264 aaKnown RBP13.47□□□□□ -0.25
PUF60-212ENST00000528320 FOXF1Q12946 379 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 PGGHGQ32M88 737 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 ELOA3BQ3SY89 546 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 ARMC4Q5T2S8 1044 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 SMARCD3Q6STE5 483 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 WDR88Q6ZMY6 472 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 KCTD8Q6ZWB6 473 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 CADM2Q8N3J6 435 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 ELOA3Q8NG57 546 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 OR2V1Q8NHB1 315 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 TMEM163Q8TC26 289 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 FANK1Q8TC84 345 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 RFKQ969G6 155 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 SGTBQ96EQ0 304 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 DACH2Q96NX9 599 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 GPA33Q99795 319 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 SMR3AQ99954 134 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 COPS4Q9BT78 406 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 PRR14Q9BWN1 585 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 RBM38Q9H0Z9 239 aaKnown RBP13.47□□□□□ -0.25
PUF60-212ENST00000528320 MRPS18AQ9NVS2 196 aaKnown RBP13.47□□□□□ -0.25
PUF60-212ENST00000528320 PAQR5Q9NXK6 330 aaPredicted RBP13.47□□□□□ -0.25
PUF60-212ENST00000528320 GALNT8Q9NY28 637 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.47□□□□□ -0.256e-6■□□□□ 8.7
PUF60-212ENST00000528320 SIGLEC7Q9Y286 467 aa13.47□□□□□ -0.25
PUF60-212ENST00000528320 IDH3BO43837 385 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 PTP4A3O75365 173 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 SOX14O95416 240 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 CDK1P06493 297 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 FMO3P31513 532 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 RNF144AP50876 292 aaPredicted RBP13.46□□□□□ -0.25
PUF60-212ENST00000528320 CDH15P55291 814 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 NKX6-1P78426 367 aaPredicted RBP13.46□□□□□ -0.25
PUF60-212ENST00000528320 SHEQ5VZ18 495 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 FAM214BQ7L5A3 538 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 GRINAQ7Z429 371 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 SATL1Q86VE3 508 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 KRTAP1-3Q8IUG1 177 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 CCDC103Q8IW40 242 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 LNX2Q8N448 690 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 TMCO5AQ8N6Q1 288 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 ZNF563Q8TA94 476 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 SMPDL3BQ92485 455 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 KLHL15Q96M94 604 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 RBM24Q9BX46 236 aaKnown RBP13.46□□□□□ -0.25
PUF60-212ENST00000528320 TSSK6Q9BXA6 273 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 CDCA4Q9BXL8 241 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 OR52D1Q9H346 318 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 MEPEQ9NQ76 525 aaPredicted RBP13.46□□□□□ -0.25
PUF60-212ENST00000528320 PLSCR4Q9NRQ2 329 aa13.46□□□□□ -0.25
PUF60-212ENST00000528320 ARID1AO14497 2285 aa13.46□□□□□ -0.26
PUF60-212ENST00000528320 FN1P02751 2386 aaKnown RBP13.45□□□□□ -0.26
PUF60-212ENST00000528320 EIF1AYO14602 144 aaKnown RBP13.45□□□□□ -0.26
PUF60-212ENST00000528320 PRODHO43272 600 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 CXCL13O43927 109 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 SS18L1O75177 396 aaPredicted RBP13.45□□□□□ -0.26
PUF60-212ENST00000528320 SEC14L2O76054 403 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 MT-ATP6P00846 226 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 HTR1AP08908 422 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 SAGP10523 405 aaPredicted RBP13.45□□□□□ -0.26
PUF60-212ENST00000528320 APEHP13798 732 aaKnown RBP13.45□□□□□ -0.26
PUF60-212ENST00000528320 PCMT1P22061 227 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 SLC6A6P31641 620 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 GPR4P46093 362 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 EIF1AXP47813 144 aaKnown RBP13.45□□□□□ -0.26
PUF60-212ENST00000528320 POLR2HP52434 150 aaKnown RBP13.45□□□□□ -0.26
PUF60-212ENST00000528320 MFSD13AQ14CX5 517 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 QPRTQ15274 297 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 SNAPC1Q16533 368 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 KLHL22Q53GT1 634 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 CLEC9AQ6UXN8 241 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 Q71RC1 249 aaPredicted RBP13.45□□□□□ -0.26
PUF60-212ENST00000528320 CHMP1BQ7LBR1 199 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 GID4Q8IVV7 300 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 OR13F1Q8NGS4 319 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 STK35Q8TDR2 534 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 MUL1Q969V5 352 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 GMPPAQ96IJ6 420 aaPredicted RBP13.45□□□□□ -0.26
PUF60-212ENST00000528320 PLEKHA8Q96JA3 519 aa13.45□□□□□ -0.26
PUF60-212ENST00000528320 GPX7Q96SL4 187 aaPredicted RBP13.45□□□□□ -0.26
PUF60-212ENST00000528320 ING1Q9UK53 422 aaPredicted RBP13.45□□□□□ -0.26
PUF60-212ENST00000528320 FAM171A2A8MVW0 826 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms