RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 ANKRA2Q9H9E1 313 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 POPDC2Q9HBU9 364 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC25A19Q9HC21 320 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 CSNK1G1Q9HCP0 422 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 C6orf50Q9HD87 102 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 SERHLQ9NQF3 203 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 TUBG2Q9NRH3 451 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC2A9Q9NRM0 540 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 PNO1Q9NRX1 252 aaKnown RBP3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 MIOSQ9NXC5 875 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 MS4A12Q9NXJ0 267 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 TAS2R14Q9NYV8 317 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 SPG21Q9NZD8 308 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 OR14J1Q9UGF5 321 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 FBXL3Q9UKT7 428 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 SAMD4AQ9UPU9 718 aaKnown RBP3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 CNTN6Q9UQ52 1028 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 PCYT1BQ9Y5K3 369 aaPredicted RBP3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 PRSS21Q9Y6M0 314 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 COLEC10Q9Y6Z7 277 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 PAPPAQ13219 1627 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 TJP1Q07157 1748 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 QSER1Q2KHR3 1735 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 NUP188Q5SRE5 1749 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 DOT1LQ8TEK3 1739 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 KIR2DL5BA0A0G2JN68 375 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 LOC102723532A0A0G2JNH3 316 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 KIR2DL5BA0A0G2JPC4 375 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 A0A1B0GUH1 482 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2M5A3KFT3 312 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CPED1A4D0V7 1026 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OR5H15A6NDH6 313 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM90A8PA6NJQ4 464 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OR5H1A6NKK0 313 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF726A6NNF4 738 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF724A8MTY0 619 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 C9J4A7 227 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SDHDO14521 159 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 UBFD1O14562 309 aaKnown RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CASKO14936 926 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CYB5BO43169 146 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF264O43296 627 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 PLRG1O43660 514 aaKnown RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ANXA9O76027 345 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2A4O95047 310 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 TOMM40O96008 361 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 GCGP01275 180 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 HIST1H2ABP04908 130 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ALDOBP05062 364 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 BCHEP06276 602 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 HMBSP08397 361 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 HOXC6P09630 235 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM90A13PP0C7W8 464 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM90A24PP0C7X0 464 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 TBC1D3HP0C7X1 549 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CCL2P13500 99 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF35P13682 527 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 OSMP13725 252 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 GTF2F2P13984 249 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 IRF2P14316 349 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FOSL2P15408 326 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 RPA2P15927 270 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 MGMTP16455 207 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 GGT1P19440 569 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SRMP19623 302 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SERPINA2P20848 420 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC2A5P22732 501 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CORO1AP31146 461 aaKnown RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 IL2RGP31785 369 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ELK3P41970 407 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 MAGEA3P43357 314 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 INPP1P49441 399 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 COMPP49747 757 aaPredicted RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CLDN18P56856 261 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 RGS8P57771 180 aaPredicted RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 TAS2R38P59533 333 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ZP1P60852 638 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 RAB8AP61006 207 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SEC61A1P61619 476 aaKnown RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CDC42EP1Q00587 391 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 MYL7Q01449 175 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SPOCK1Q08629 439 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF616Q08AN1 781 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SIGLEC14Q08ET2 396 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC10A7Q0GE19 358 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 MTAPQ13126 283 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 RUNX2Q13950 521 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 KIAA0141Q14154 515 aaPredicted RBP3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 CSHL1Q14406 222 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 PTPRCAPQ14761 206 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC17A1Q14916 467 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 ABRAXAS2Q15018 415 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 TAF9Q16594 264 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM241Q24JQ0 296 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 GSG1Q2KHT4 349 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 SMIM21Q3B7S5 101 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 FBXO47Q5MNV8 452 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 COL5A1-AS1Q5SY13 56 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 BCL2L15Q5TBC7 163 aa3.35□□□□□ -1.87
CLNS1A-209ENST00000527299 C9orf135Q5VTT2 229 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms