RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 CHD3Q12873 2000 aaKnown RBP14.07□□□□□ -0.16
CLN8-206ENST00000523237 YLPM1P49750 1951 aaKnown RBP14.06□□□□□ -0.16
CLN8-206ENST00000523237 BLOC1S5-TXNDC5H3BN57 136 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 CD5LO43866 347 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 ENTPD5O75356 428 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 OR7A10O76100 309 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 BCL10O95999 233 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 IGF2P01344 180 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 THRBP10828 461 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 NPR2P20594 1047 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 UGT2B15P54855 530 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 SELENOWP63302 87 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 PIGFQ07326 219 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 MELKQ14680 651 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 PIWIL3Q7Z3Z3 882 aaKnown RBP14.06□□□□□ -0.16
CLN8-206ENST00000523237 PFN4Q8NHR9 129 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 C10orf105Q8TEF2 133 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 TMEM239Q8WW34 195 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 LZICQ8WZA0 190 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 SGTBQ96EQ0 304 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 SORCS2Q96PQ0 1159 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 VRK1Q99986 396 aaPredicted RBP14.06□□□□□ -0.16
CLN8-206ENST00000523237 PLK3Q9H4B4 646 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 NOX3Q9HBY0 568 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 ABCA1O95477 2261 aa14.06□□□□□ -0.16
CLN8-206ENST00000523237 A0A096LNT2 108 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 A0A1W2PRG6 482 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 TLX2O43763 284 aaPredicted RBP14.05□□□□□ -0.16
CLN8-206ENST00000523237 LY6HO94772 140 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 UBL3O95164 117 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 RAB36O95755 333 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 IGHG1P01857 330 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 PGA4P0DJD7 388 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 PGA3P0DJD8 388 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 COX4I1P13073 169 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 ZNF14P17017 642 aaPredicted RBP14.05□□□□□ -0.16
CLN8-206ENST00000523237 FUT1P19526 365 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 IFNA8P32881 189 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 THBS4P35443 961 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 PTDSS1P48651 473 aaKnown RBP14.05□□□□□ -0.16
CLN8-206ENST00000523237 PPOXP50336 477 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 RPL18Q07020 188 aaKnown RBP14.05□□□□□ -0.16
CLN8-206ENST00000523237 LOXL1Q08397 574 aaPredicted RBP14.05□□□□□ -0.16
CLN8-206ENST00000523237 DAG1Q14118 895 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 TNFRSF13CQ96RJ3 184 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 C20orf141Q9NUB4 165 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 CMTM6Q9NX76 183 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 FBXL3Q9UKT7 428 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 MED31Q9Y3C7 131 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 SPEF1Q9Y4P9 236 aa14.05□□□□□ -0.16
CLN8-206ENST00000523237 MCIDASD6RGH6 385 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 hCG_2039718K7EN88 272 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 DHHO43323 396 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 CRLF1O75462 422 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 F13BP05160 661 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 OR8G3PP0DMU2 310 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 PDLIM4P50479 330 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 CLRN1P58418 232 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 RAB1AP62820 205 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 ST3GAL3Q11203 375 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 SNTB2Q13425 540 aaKnown RBP14.04□□□□□ -0.16
CLN8-206ENST00000523237 KRT80Q6KB66 452 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 LRFN4Q6PJG9 635 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 HDDC2Q7Z4H3 204 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 SPATA21Q7Z572 469 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 SLC15A3Q8IY34 581 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 SLC22A24Q8N4F4 322 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 LIPHQ8WWY8 451 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 MS4A3Q96HJ5 214 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 PRRC1Q96M27 445 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 ZNF75AQ96N20 296 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 HOPXQ9BPY8 73 aaPredicted RBP14.04□□□□□ -0.16
CLN8-206ENST00000523237 EFCAB1Q9HAE3 211 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 MYOZ1Q9NP98 299 aaPredicted RBP14.04□□□□□ -0.16
CLN8-206ENST00000523237 YAE1D1Q9NRH1 226 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 INIPQ9NRY2 104 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 ZNF224Q9NZL3 707 aa14.04□□□□□ -0.16
CLN8-206ENST00000523237 HTR3EA5X5Y0 456 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 NDUFS8O00217 210 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 GPRIN2O60269 458 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 FARS2O95363 451 aaKnown RBP14.03□□□□□ -0.16
CLN8-206ENST00000523237 ERCC1P07992 297 aaPredicted RBP14.03□□□□□ -0.16
CLN8-206ENST00000523237 QDPRP09417 244 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 NR4A1P22736 598 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 GIPRP48546 466 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 DAP3P51398 398 aaKnown RBP14.03□□□□□ -0.16
CLN8-206ENST00000523237 LIPEQ05469 1076 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 TMEM249Q2WGJ8 235 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 SKA3Q8IX90 412 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 SVOPLQ8N434 492 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 ANKS4BQ8N8V4 417 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 PIMREGQ9BSJ6 248 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 RAB1BQ9H0U4 201 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 TMEM38BQ9NVV0 291 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 STX18Q9P2W9 335 aaKnown RBP14.03□□□□□ -0.16
CLN8-206ENST00000523237 CMAHPQ9Y471 501 aa14.03□□□□□ -0.16
CLN8-206ENST00000523237 CENPBD1B2RD01 187 aa14.02□□□□□ -0.17
CLN8-206ENST00000523237 CXCR6O00574 342 aa14.02□□□□□ -0.17
CLN8-206ENST00000523237 NDUFAB1O14561 156 aa14.02□□□□□ -0.17
CLN8-206ENST00000523237 GSTA4O15217 222 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms