RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 C10orf105Q8TEF2 133 aa16.18■□□□□ 0.18
SPIDR-220ENST00000522900 TMEM239Q8WW34 195 aa16.18■□□□□ 0.18
SPIDR-220ENST00000522900 FAM168AQ92567 244 aa16.18■□□□□ 0.18
SPIDR-220ENST00000522900 TPD52L3Q96J77 140 aa16.18■□□□□ 0.18
SPIDR-220ENST00000522900 VRK1Q99986 396 aaPredicted RBP16.18■□□□□ 0.18
SPIDR-220ENST00000522900 TLN2Q9Y4G6 2542 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 TMEM129A0AVI4 362 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 B9A039 149 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 PIP5K1CO60331 668 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 OR7A10O76100 309 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 F13BP05160 661 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 ZNF14P17017 642 aaPredicted RBP16.17■□□□□ 0.18
SPIDR-220ENST00000522900 RBM34P42696 430 aaKnown RBP16.17■□□□□ 0.18
SPIDR-220ENST00000522900 SNRPD2P62316 118 aaKnown RBP16.17■□□□□ 0.18
SPIDR-220ENST00000522900 SELENOWP63302 87 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 LSM11P83369 360 aaKnown RBP eCLIP16.17■□□□□ 0.18
SPIDR-220ENST00000522900 EFNB3Q15768 340 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 NANOGNBQ7Z5D8 188 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 SKA3Q8IX90 412 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 ZNF566Q969W8 418 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 SGTBQ96EQ0 304 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 SLC25A44Q96H78 314 aaPredicted RBP16.17■□□□□ 0.18
SPIDR-220ENST00000522900 PLK3Q9H4B4 646 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 ADAM21Q9UKJ8 722 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 SNX13Q9Y5W8 968 aa16.17■□□□□ 0.18
SPIDR-220ENST00000522900 CR1P17927 2039 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 CD5LO43866 347 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 PDE5AO76074 875 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 BCL10O95999 233 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 TP53P04637 393 aaPredicted RBP16.16■□□□□ 0.18
SPIDR-220ENST00000522900 PGA4P0DJD7 388 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 PGA3P0DJD8 388 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 NPR2P20594 1047 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 AQP2P41181 271 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 YAP1P46937 504 aaKnown RBP16.16■□□□□ 0.18
SPIDR-220ENST00000522900 PTDSS1P48651 473 aaKnown RBP16.16■□□□□ 0.18
SPIDR-220ENST00000522900 RAB1AP62820 205 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 LIPEQ05469 1076 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 RPL18Q07020 188 aaKnown RBP16.16■□□□□ 0.18
SPIDR-220ENST00000522900 LAPTM4AQ15012 233 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 MSMPQ1L6U9 139 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 KRT80Q6KB66 452 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 VTCN1Q7Z7D3 282 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 ZCCHC24Q8N2G6 241 aaKnown RBP16.16■□□□□ 0.18
SPIDR-220ENST00000522900 MOSPD2Q8NHP6 518 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 DOK1Q99704 481 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 POLR2J2Q9GZM3 115 aaKnown RBP16.16■□□□□ 0.18
SPIDR-220ENST00000522900 POLR2J3Q9H1A7 115 aaKnown RBP16.16■□□□□ 0.18
SPIDR-220ENST00000522900 ZNF442Q9H7R0 627 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 YAE1D1Q9NRH1 226 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 A4GNTQ9UNA3 340 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 HIVEP2P31629 2446 aa16.16■□□□□ 0.18
SPIDR-220ENST00000522900 KIAA1324LA8MWY0 1029 aaPredicted RBP16.15■□□□□ 0.18
SPIDR-220ENST00000522900 hCG_2039718K7EN88 272 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 NME4O00746 187 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 DHHO43323 396 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 CCDC22O60826 627 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 CRLF1O75462 422 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 IGFBP1P08833 259 aaPredicted RBP16.15■□□□□ 0.18
SPIDR-220ENST00000522900 QDPRP09417 244 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 ZNF35P13682 527 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 GIPRP48546 466 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 MYBPC1Q00872 1141 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 DAG1Q14118 895 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 C8orf82Q6P1X6 216 aaPredicted RBP16.15■□□□□ 0.18
SPIDR-220ENST00000522900 PIWIL3Q7Z3Z3 882 aaKnown RBP16.15■□□□□ 0.18
SPIDR-220ENST00000522900 SPATA21Q7Z572 469 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 SVOPLQ8N434 492 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 SLC22A24Q8N4F4 322 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 IL17RDQ8NFM7 739 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 TNFRSF13CQ96RJ3 184 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 ZNF347Q96SE7 839 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 SH3GL3Q99963 347 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 ELAC2Q9BQ52 826 aaKnown RBP16.15■□□□□ 0.18
SPIDR-220ENST00000522900 TMEM38BQ9NVV0 291 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 RHCGQ9UBD6 479 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 MED31Q9Y3C7 131 aa16.15■□□□□ 0.18
SPIDR-220ENST00000522900 SH3PXD2BA1X283 911 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 J3KTA2 159 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 TSPAN19P0C672 248 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 THRBP10828 461 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 SLC25A16P16260 332 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 NR4A1P22736 598 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 SLC7A2P52569 658 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 SEC24CP53992 1094 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 LOXL1Q08397 574 aaPredicted RBP16.14■□□□□ 0.17
SPIDR-220ENST00000522900 SNTB2Q13425 540 aaKnown RBP16.14■□□□□ 0.17
SPIDR-220ENST00000522900 RAB39AQ14964 217 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 HIST3H3Q16695 136 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 TMEM249Q2WGJ8 235 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 MEX3DQ86XN8 651 aaKnown RBP16.14■□□□□ 0.17
SPIDR-220ENST00000522900 SYT14Q8NB59 555 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 LIPHQ8WWY8 451 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 MCHR2Q969V1 340 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 FOXN4Q96NZ1 517 aa16.14■□□□□ 0.17
SPIDR-220ENST00000522900 MRPL13Q9BYD1 178 aaKnown RBP16.14■□□□□ 0.17
SPIDR-220ENST00000522900 A0A1W2PRG6 482 aa16.13■□□□□ 0.17
SPIDR-220ENST00000522900 VWC2LB2RUY7 222 aa16.13■□□□□ 0.17
SPIDR-220ENST00000522900 CXCR6O00574 342 aa16.13■□□□□ 0.17
SPIDR-220ENST00000522900 FFAR1O14842 300 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms