RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 LOC100653049A0A140TA62 436 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF716A6NP11 495 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 BBIP1A8MTZ0 92 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 UPK1AO00322 258 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 PEX11AO75192 247 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 SKAP2O75563 359 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-210ENST00000522843 SLC22A3O75751 556 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 KRT34O76011 436 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 PRSS23O95084 383 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 BCL10O95999 233 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 PDYNP01213 254 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 PRB2P02812 416 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-210ENST00000522843 KRT16P08779 473 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 NQO1P15559 274 aaKnown RBP5.66□□□□□ -1.5
SDCBP-210ENST00000522843 ME2P23368 584 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 COL8A2P25067 703 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 ELK4P28324 431 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 CALCRP30988 508 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 MAP3K8P41279 467 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 GSTM5P46439 218 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 SLC6A9P48067 706 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 HTR6P50406 440 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF41P51814 821 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-210ENST00000522843 CLDN8P56748 225 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 DECR1Q16698 335 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 ABLIM2Q6H8Q1 611 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 LEG1Q6P5S2 330 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 CBLN3Q6UW01 205 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 MSANTD1Q6ZTZ1 278 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 GALNT5Q7Z7M9 940 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 RIMKLAQ8IXN7 391 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 DDIASQ8IXT1 998 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF100Q8IYN0 542 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 BPIFB2Q8N4F0 458 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 RBM15BQ8NDT2 890 aaKnown RBP5.66□□□□□ -1.5
SDCBP-210ENST00000522843 ATP6V1C2Q8NEY4 427 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 TOR1AIP2Q8NFQ8 470 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 OR51F2Q8NH61 342 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 ZFP90Q8TF47 636 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 SELENOMQ8WWX9 145 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 PIK3R3Q92569 461 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 ROPN1LQ96C74 230 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 CITED1Q99966 193 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 HOPXQ9BPY8 73 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-210ENST00000522843 LMF2Q9BU23 707 aaKnown RBP5.66□□□□□ -1.5
SDCBP-210ENST00000522843 CADM1Q9BY67 442 aaKnown RBP5.66□□□□□ -1.5
SDCBP-210ENST00000522843 ACPTQ9BZG2 426 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 ELOVL6Q9H5J4 265 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 TIGARQ9NQ88 270 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 TAS2R16Q9NYV7 291 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 TAS2R9Q9NYW1 312 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 SLC23A1Q9UHI7 598 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 C19orf53Q9UNZ5 99 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-210ENST00000522843 COL7A1Q02388 2944 aa5.66□□□□□ -1.5
SDCBP-210ENST00000522843 hCG_2039718K7EN88 272 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 FBP2O00757 339 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 GYG2O15488 501 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 PLPP2O43688 288 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 MGRN1O60291 552 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 TBX19O60806 448 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 SEC22BO75396 215 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 TFP02787 698 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 IL6P05231 212 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 NGFRP08138 427 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 IL3P08700 152 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 SAGP10523 405 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-210ENST00000522843 EGR2P11161 476 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-210ENST00000522843 BCKDHAP12694 445 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 PRPS1L1P21108 318 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 OMGP23515 440 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 SLC6A2P23975 617 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 GABRA3P34903 492 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 THBS4P35443 961 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 STX1BP61266 288 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 RAE1P78406 368 aaKnown RBP5.65□□□□□ -1.5
SDCBP-210ENST00000522843 BLOC1S1P78537 153 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 IL1RL1Q01638 556 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 ZNF117Q03924 483 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 ZP4Q12836 540 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 GLIPR1L2Q4G1C9 344 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 SPIN4Q56A73 249 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 TCHHL1Q5QJ38 904 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-210ENST00000522843 IL23RQ5VWK5 629 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 OR7E24Q6IFN5 339 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 NOXRED1Q6NXP6 359 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 TMEM107Q6UX40 140 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 PAGE2Q7Z2X7 111 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 MYPOPQ86VE0 399 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-210ENST00000522843 CDK20Q8IZL9 346 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 UBE2J2Q8N2K1 259 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 OR2L13Q8N349 312 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 C1orf52Q8N6N3 182 aaKnown RBP5.65□□□□□ -1.5
SDCBP-210ENST00000522843 FNDC5Q8NAU1 212 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 B4GALNT2Q8NHY0 566 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 YIPF5Q969M3 257 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 TESCQ96BS2 214 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 RAB3IPQ96QF0 476 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-210ENST00000522843 TPK1Q9H3S4 243 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 NTN4Q9HB63 628 aa5.65□□□□□ -1.5
SDCBP-210ENST00000522843 Q9N2J8 555 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms