RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 GLTPQ9NZD2 209 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 BLOC1S5-TXNDC5H3BN57 136 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 VIMP08670 466 aaKnown RBP17.89■□□□□ 0.45
SDCBP-209ENST00000522243 ASAH2BP0C7U1 165 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 IGHV4-31P0DP07 118 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 ZNF16P17020 682 aaPredicted RBP17.89■□□□□ 0.45
SDCBP-209ENST00000522243 NR4A2P43354 598 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 GIPRP48546 466 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 TAS2R41P59536 307 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 RAB1AP62820 205 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 CHRFAM7AQ494W8 412 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 CYB5R2Q6BCY4 276 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 NANOGNBQ7Z5D8 188 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 NKAIN4Q8IVV8 208 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 SKA3Q8IX90 412 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 PFN4Q8NHR9 129 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 FGFBP3Q8TAT2 258 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 RAB1BQ9H0U4 201 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 ZNF229Q9UJW7 825 aa17.89■□□□□ 0.45
SDCBP-209ENST00000522243 ZNF14P17017 642 aaPredicted RBP17.88■□□□□ 0.45
SDCBP-209ENST00000522243 OR1E2P47887 323 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 UGT2B15P54855 530 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 MAPRE2Q15555 327 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 MSMPQ1L6U9 139 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 COQ5Q5HYK3 327 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 CDK20Q8IZL9 346 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 TMEM255BQ8WV15 326 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 C10orf82Q8WW14 230 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 ZNF566Q969W8 418 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 ZNF583Q96ND8 569 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 KCNK17Q96T54 332 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 SLC19A3Q9BZV2 496 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 DYNLRB1Q9NP97 96 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 BAG5Q9UL15 447 aa17.88■□□□□ 0.45
SDCBP-209ENST00000522243 SONP18583 2426 aaKnown RBP17.87■□□□□ 0.45
SDCBP-209ENST00000522243 LOC390937A0A1W2PQ73 354 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 BBIP1A8MTZ0 92 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 NDUFS8O00217 210 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 RAB36O95755 333 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 BCL10O95999 233 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 F13BP05160 661 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 FUT1P19526 365 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 NR4A1P22736 598 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 GUCY1A3Q02108 690 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 PIN1Q13526 163 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-209ENST00000522243 RAB39AQ14964 217 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 IQCCQ4KMZ1 466 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 LRRC23Q53EV4 343 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-209ENST00000522243 ERICH5Q6P6B1 374 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 LRFN4Q6PJG9 635 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 SLC25A44Q96H78 314 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-209ENST00000522243 RIMS3Q9UJD0 308 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 CMAHPQ9Y471 501 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 JMJD1CQ15652 2540 aa17.87■□□□□ 0.45
SDCBP-209ENST00000522243 ANK3Q12955 4377 aaKnown RBP17.86■□□□□ 0.45
SDCBP-209ENST00000522243 IGHV4-61A0A0C4DH41 118 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 UBL3O95164 117 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 NPPAP01160 153 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 MT-ND1P03886 318 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 IGFBP1P08833 259 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-209ENST00000522243 ADRA2AP08913 450 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 PGA4P0DJD7 388 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 PGA3P0DJD8 388 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 ZNF35P13682 527 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 MYBPC1Q00872 1141 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 RPL18Q07020 188 aaKnown RBP17.86■□□□□ 0.45
SDCBP-209ENST00000522243 SLC22A24Q8N4F4 322 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 PCYOX1LQ8NBM8 494 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 SH3GL3Q99963 347 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 MRPL37Q9BZE1 423 aaKnown RBP17.86■□□□□ 0.45
SDCBP-209ENST00000522243 BPESC1Q9GZL8 116 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 TPK1Q9H3S4 243 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 MYOZ1Q9NP98 299 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-209ENST00000522243 C20orf141Q9NUB4 165 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 MRGBPQ9NV56 204 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 TMEM38BQ9NVV0 291 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 ZNF446Q9NWS9 450 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 GID8Q9NWU2 228 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 ARMCX1Q9P291 453 aa17.86■□□□□ 0.45
SDCBP-209ENST00000522243 FAM220BPB1ANY3 271 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 DHHO43323 396 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 OR7A10O76100 309 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 STAMBPO95630 424 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 QDPRP09417 244 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 OR8G3PP0DMU2 310 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 APEHP13798 732 aaKnown RBP17.85■□□□□ 0.45
SDCBP-209ENST00000522243 DAOP14920 347 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 CLRN1P58418 232 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 RUNX1T1Q06455 604 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 CYBRD1Q53TN4 286 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 PIWIL3Q7Z3Z3 882 aaKnown RBP17.85■□□□□ 0.45
SDCBP-209ENST00000522243 POU5F2Q8N7G0 328 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 TMEM239Q8WW34 195 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 NEU4Q8WWR8 484 aaPredicted RBP17.85■□□□□ 0.45
SDCBP-209ENST00000522243 MRPL24Q96A35 216 aaKnown RBP17.85■□□□□ 0.45
SDCBP-209ENST00000522243 SGTBQ96EQ0 304 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 TPD52L3Q96J77 140 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 ZNF347Q96SE7 839 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 GMPR2Q9P2T1 348 aaKnown RBP17.85■□□□□ 0.45
SDCBP-209ENST00000522243 FZR1Q9UM11 496 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms