RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	HLA-H	P01893	362 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	SEMG1	P04279	462 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	SOD3	P08294	240 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	CELA3B	P08861	270 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	QDPR	P09417	244 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	CECR9	P0C854	216 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	PGA4	P0DJD7	388 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	PGA3	P0DJD8	388 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ITGA2	P17301	1181 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	RPL4	P36578	427 aa	Known RBP	7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	CDKN1A	P38936	164 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	SLC9A3	P48764	834 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	LCN6	P62502	163 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	PRKCD	Q05655	676 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	RUNX1T1	Q06455	604 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	FMOD	Q06828	376 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	PIGF	Q07326	219 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	SEC23B	Q15437	767 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	FXN	Q16595	210 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	VHLL	Q6RSH7	139 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	NHLRC1	Q6VVB1	395 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	SSX8	Q7RTT4	187 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	MDP1	Q86V88	176 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	MYPOP	Q86VE0	399 aa	Predicted RBP	7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	DHFR2	Q86XF0	187 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	DEPDC4	Q8N2C3	294 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ZNF611	Q8N823	705 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	OR4K5	Q8NGD3	323 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	OR6X1	Q8NH79	312 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	SLC7A13	Q8TCU3	470 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	SMAP2	Q8WU79	429 aa	Predicted RBP	7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	NSMAF	Q92636	917 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	HDAC2	Q92769	488 aa	Known RBP	7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	TMEM54	Q969K7	222 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	PIGT	Q969N2	578 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	SLC25A44	Q96H78	314 aa	Predicted RBP	7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	C7orf34	Q96L11	122 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	LRR1	Q96L50	414 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	LRGUK	Q96M69	825 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	SLC38A2	Q96QD8	506 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	TNFRSF13C	Q96RJ3	184 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	FOXC2	Q99958	501 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ANKRD19P	Q9H560	264 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	KRCC1	Q9NPI7	259 aa	Predicted RBP	7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	BEX4	Q9NWD9	120 aa	Predicted RBP	7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ACTR3B	Q9P1U1	418 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	IL20RA	Q9UHF4	553 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	PRPF19	Q9UMS4	504 aa	Known RBP	7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	MGAT4B	Q9UQ53	548 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	AURKC	Q9UQB9	309 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	TMEM5	Q9Y2B1	443 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	HIF3A	Q9Y2N7	669 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ROS1	P08922	2347 aa		7.3	□□□□□ -1.24
CTNNA1-231	ENST00000521941	PRRC2A	P48634	2157 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ARPC4-TTLL3	A0A0A6YYG9	625 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941		A0A1W2PRQ8	180 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941		E7EQL1	145 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	GYG2	O15488	501 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	DHH	O43323	396 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	OR10H3	O60404	316 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	SLC2A10	O95528	541 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	RAB36	O95755	333 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	IGF2	P01344	180 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	PATE4	P0C8F1	98 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ACADS	P16219	412 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ACVR1B	P36896	505 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	PTDSS1	P48651	473 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	PTH2R	P49190	550 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ERF	P50548	548 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	FABP6	P51161	128 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ZNF84	P51523	738 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	RPS4X	P62701	263 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ERVK-25	P63136	954 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	NKX6-1	P78426	367 aa	Predicted RBP	7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	PPP1R8	Q12972	351 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	DGCR6	Q14129	220 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	TESK1	Q15569	626 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941		Q5PR19	223 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	HDDC2	Q7Z4H3	204 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	RNF113B	Q8IZP6	322 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	CLDN22	Q8N7P3	220 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	WFDC11	Q8NEX6	87 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	FANK1	Q8TC84	345 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	MAGEE2	Q8TD90	523 aa	Predicted RBP	7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	LIPH	Q8WWY8	451 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	NANOS1	Q8WY41	292 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	MCHR2	Q969V1	340 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	MBD6	Q96DN6	1003 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	MS4A3	Q96HJ5	214 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	RSRC1	Q96IZ7	334 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	TSPAN32	Q96QS1	320 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	SH3GL3	Q99963	347 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	KATNB1	Q9BVA0	655 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	TXNIP	Q9H3M7	391 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	CXorf56	Q9H5V9	222 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	NOX3	Q9HBY0	568 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	OBP2B	Q9NPH6	170 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	TAS2R1	Q9NYW7	299 aa		7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ZNF346	Q9UL40	294 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-231	ENST00000521941	ADAM18	Q9Y3Q7	739 aa		7.29	□□□□□ -1.24

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