RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 GDNFP39905 211 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 NOVA1P51513 510 aaKnown RBP14.9□□□□□ -0.02
USP42-207ENST00000521713 LPCAT3Q6P1A2 487 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 MKXQ8IYA7 352 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 MARC2Q969Z3 335 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 TMEM68Q96MH6 324 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 C1orf198Q9H425 327 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 UFSP2Q9NUQ7 469 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 AGAP14A8MT82 685 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 SCGB2A1O75556 95 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 CRTAPO75718 401 aaPredicted RBP14.9□□□□□ -0.02
USP42-207ENST00000521713 PEX11BO96011 259 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 TPOP07202 933 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 ILKQ13418 452 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 SLC36A2Q495M3 483 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 SLC22A11Q9NSA0 550 aa14.9□□□□□ -0.02
USP42-207ENST00000521713 CCDC187A0A096LP49 1063 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 TRBV4-1A0A0J9YWV2 114 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 TMEM82A0PJX8 343 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 FAM183AA6NL82 134 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 MT-ATP6P00846 226 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 HBE1P02100 147 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 MSR1P21757 451 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 GPR50Q13585 617 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 FOXB2Q5VYV0 432 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 CMTM1Q8IZ96 169 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 IL17RDQ8NFM7 739 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 OR51T1Q8NGJ9 327 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 FRZBQ92765 325 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 SLC35B4Q969S0 331 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 C4orf36Q96KX1 117 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 LRRC61Q9BV99 259 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 KLF13Q9Y2Y9 288 aaPredicted RBP14.89□□□□□ -0.03
USP42-207ENST00000521713 SERPINF1P36955 418 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 AKR1C2P52895 323 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 ATP1B3P54709 279 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 BHLHA9Q7RTU4 235 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 OR2A1Q8NGT9 310 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 GCDHQ92947 438 aaPredicted RBP14.89□□□□□ -0.03
USP42-207ENST00000521713 SEMA4GQ9NTN9 838 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 POM121CA8CG34 1229 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 GPR137BO60478 399 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 KCNK2O95069 426 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 TNFSF15O95150 251 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 MPLP40238 635 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 PPICP45877 212 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 EIF3IQ13347 325 aaKnown RBP14.89□□□□□ -0.03
USP42-207ENST00000521713 COX20Q5RI15 118 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 VASH1Q7L8A9 365 aaPredicted RBP14.89□□□□□ -0.03
USP42-207ENST00000521713 CPEB2Q7Z5Q1 589 aaKnown RBP14.89□□□□□ -0.03
USP42-207ENST00000521713 ZNF695Q8IW36 515 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 OSGIN1Q9UJX0 560 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 IGHV3-20A0A0C4DH32 117 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 SERPINA5P05154 406 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 HTR5AP47898 357 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 FUNDC1Q8IVP5 155 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 NPRL2Q8WTW4 380 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 CCDC74BQ96LY2 380 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 TNFRSF13CQ96RJ3 184 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 SLCO5A1Q9H2Y9 848 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 TCEAL2Q9H3H9 227 aaPredicted RBP14.89□□□□□ -0.03
USP42-207ENST00000521713 ELOVL3Q9HB03 270 aa14.89□□□□□ -0.03
USP42-207ENST00000521713 A0A1B0GV50 99 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 ACTL6BO94805 426 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 LTBQ06643 244 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 TRA2AQ13595 282 aaKnown RBP eCLIP14.88□□□□□ -0.03
USP42-207ENST00000521713 IL10RAQ13651 578 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 TRMT12Q53H54 448 aaKnown RBP14.88□□□□□ -0.03
USP42-207ENST00000521713 MARCH3Q86UD3 253 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 NRSN2Q9GZP1 204 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 FBXO7Q9Y3I1 522 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 MN1Q10571 1320 aaPredicted RBP14.88□□□□□ -0.03
USP42-207ENST00000521713 NUDT21O43809 227 aaKnown RBP14.88□□□□□ -0.03
USP42-207ENST00000521713 KNG1P01042 644 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 PIPP12273 146 aaPredicted RBP14.88□□□□□ -0.03
USP42-207ENST00000521713 APEX1P27695 318 aaKnown RBP14.88□□□□□ -0.03
USP42-207ENST00000521713 SLC1A3P43003 542 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 GFERP55789 205 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 SNX11Q9Y5W9 270 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 ETV7Q9Y603 341 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 DPM1O60762 260 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 TGM4P49221 684 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 P2RX1P51575 399 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 RAB4BP61018 213 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 DUSP5Q16690 384 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 DPY19L2P2Q6ZN68 376 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 MRPL41Q8IXM3 137 aaKnown RBP14.88□□□□□ -0.03
USP42-207ENST00000521713 BPIFB2Q8N4F0 458 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 MRGPRX3Q96LB0 322 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 SDHAF2Q9NX18 166 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 PCDHB10Q9UN67 800 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 BOLA1Q9Y3E2 137 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 ARGFXA6NJG6 315 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 TMPRSS11DO60235 418 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 FGF17O60258 216 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 CD14P08571 375 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 APOBEC1P41238 236 aaKnown RBP14.88□□□□□ -0.03
USP42-207ENST00000521713 UBE2KP61086 200 aa14.88□□□□□ -0.03
USP42-207ENST00000521713 RPL23AP62750 156 aaKnown RBP14.88□□□□□ -0.03
USP42-207ENST00000521713 VWA2Q5GFL6 755 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms