RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 SFT2D3Q587I9 215 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 NUDCD3Q8IVD9 361 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 LINC00304Q8N9R0 145 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 STEAP2Q8NFT2 490 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 ACTRT1Q8TDG2 376 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 TM4SF19Q96DZ7 209 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 TMEM43Q9BTV4 400 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 DEFB127Q9H1M4 99 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 GORASP2Q9H8Y8 452 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 TM9SF3Q9HD45 589 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 GIN1Q9NXP7 522 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 CLEC4AQ9UMR7 237 aa1.99□□□□□ -2.09
SKP1-207ENST00000520417 PNPLA6Q8IY17 1366 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 TUBGCP6Q96RT7 1819 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 TRAV26-1A0A087WT03 109 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 OR5B21A6NL26 309 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 ZNF705GA8MUZ8 300 aaPredicted RBP1.98□□□□□ -2.09
SKP1-207ENST00000520417 C12orf77C9JDV5 145 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 PEX7O00628 323 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 HSD17B6O14756 317 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 PRKAB2O43741 272 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 CLDN9O95484 217 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 ALDOBP05062 364 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 HNMTP50135 292 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 DUSP3P51452 185 aaPredicted RBP1.98□□□□□ -2.09
SKP1-207ENST00000520417 GBX2P52951 348 aaPredicted RBP1.98□□□□□ -2.09
SKP1-207ENST00000520417 CRYBB1P53674 252 aaPredicted RBP1.98□□□□□ -2.09
SKP1-207ENST00000520417 ERVK-25P63136 954 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 CDK16Q00536 496 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 ACVR1Q04771 509 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 PDIA2Q13087 525 aaKnown RBP1.98□□□□□ -2.09
SKP1-207ENST00000520417 ANKDD1AQ495B1 522 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 FILIP1LQ4L180 1135 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 THOC6Q86W42 341 aaKnown RBP1.98□□□□□ -2.09
SKP1-207ENST00000520417 OR52M1Q8NGK5 317 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 OR5D13Q8NGL4 314 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 OR1N2Q8NGR9 330 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 MAGEE2Q8TD90 523 aaPredicted RBP1.98□□□□□ -2.09
SKP1-207ENST00000520417 PYROXD1Q8WU10 500 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.98□□□□□ -2.09
SKP1-207ENST00000520417 C10orf35Q96D05 121 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 RBMXL1Q96E39 390 aaKnown RBP1.98□□□□□ -2.09
SKP1-207ENST00000520417 COQ2Q96H96 371 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 OXGR1Q96P68 337 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 CCT7Q99832 543 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 ECSITQ9BQ95 431 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 SLC39A3Q9BRY0 314 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 PARD6BQ9BYG5 372 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 RANBP3Q9H6Z4 567 aaPredicted RBP1.98□□□□□ -2.09
SKP1-207ENST00000520417 MRPL47Q9HD33 250 aaKnown RBP1.98□□□□□ -2.09
SKP1-207ENST00000520417 ADAM28Q9UKQ2 775 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 N6AMT1Q9Y5N5 214 aa1.98□□□□□ -2.09
SKP1-207ENST00000520417 FBN1P35555 2871 aaKnown RBP1.98□□□□□ -2.09
SKP1-207ENST00000520417 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.97□□□□□ -2.09
SKP1-207ENST00000520417 NFASCO94856 1347 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 FANCIQ9NVI1 1328 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 COL27A1Q8IZC6 1860 aaPredicted RBP1.97□□□□□ -2.09
SKP1-207ENST00000520417 A0A1B0GVL5 298 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 PLAC8L1A1L4L8 177 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 RRP8O43159 456 aaKnown RBP1.97□□□□□ -2.09
SKP1-207ENST00000520417 ZNF30P17039 623 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 PSMC3P17980 439 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 CD34P28906 385 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 RORAP35398 523 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 GYG1P46976 350 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 AIF1P55008 147 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 GPM6BQ13491 265 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 IMMTQ16891 758 aaKnown RBP1.97□□□□□ -2.09
SKP1-207ENST00000520417 ZBED5Q49AG3 693 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 C1orf94Q6P1W5 598 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 CNIH2Q6PI25 160 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 ENPP6Q6UWR7 440 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 RGS9BPQ6ZS82 235 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 PPP1R42Q7Z4L9 355 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 DHDDSQ86SQ9 333 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 FAM83FQ8NEG4 500 aaPredicted RBP1.97□□□□□ -2.09
SKP1-207ENST00000520417 SCFD1Q8WVM8 642 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 ACOT11Q8WXI4 607 aaPredicted RBP1.97□□□□□ -2.09
SKP1-207ENST00000520417 PDXPQ96GD0 296 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 TCEANC2Q96MN5 208 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 OR2A5Q96R48 311 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 AZI2Q9H6S1 392 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 MCCC2Q9HCC0 563 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 CARMIL3Q8ND23 1372 aa1.97□□□□□ -2.09
SKP1-207ENST00000520417 SLC31A2O15432 143 aa1.96□□□□□ -2.1
SKP1-207ENST00000520417 TIMM8AO60220 97 aaPredicted RBP1.96□□□□□ -2.1
SKP1-207ENST00000520417 SRP72O76094 671 aaKnown RBP1.96□□□□□ -2.1
SKP1-207ENST00000520417 ERLIN2O94905 339 aa1.96□□□□□ -2.1
SKP1-207ENST00000520417 MPZL1O95297 269 aa1.96□□□□□ -2.1
SKP1-207ENST00000520417 IL1BP01584 269 aa1.96□□□□□ -2.1
SKP1-207ENST00000520417 UBTFL1P0CB47 393 aaPredicted RBP1.96□□□□□ -2.1
SKP1-207ENST00000520417 GKN3PP0CG01 181 aa1.96□□□□□ -2.1
SKP1-207ENST00000520417 TCN1P20061 433 aaPredicted RBP1.96□□□□□ -2.1
SKP1-207ENST00000520417 EPS15P42566 896 aa1.96□□□□□ -2.1
SKP1-207ENST00000520417 CEBPDP49716 269 aaPredicted RBP1.96□□□□□ -2.1
SKP1-207ENST00000520417 OGDHQ02218 1023 aa1.96□□□□□ -2.1
SKP1-207ENST00000520417 SCRN3Q0VDG4 424 aa1.96□□□□□ -2.1
SKP1-207ENST00000520417 IL24Q13007 206 aa1.96□□□□□ -2.1
SKP1-207ENST00000520417 MRPL28Q13084 256 aaKnown RBP1.96□□□□□ -2.1
SKP1-207ENST00000520417 SGCAQ16586 387 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms