RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 KATNB1Q9BVA0 655 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 OR51B6Q9H340 312 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 DECR2Q9NUI1 292 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 MARCH5Q9NX47 278 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 SRPK3Q9UPE1 567 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 MYH15Q9Y2K3 1946 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 TOGARAM1Q9Y4F4 1720 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 RPLP1P05386 114 aaKnown RBP11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 TGM1P22735 817 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 XCR1P46094 333 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 PKIAP61925 76 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 CTBSQ01459 385 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 EXOSC7Q15024 291 aaKnown RBP11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 TMUB2Q71RG4 321 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 HLA-CQ95604 372 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 MRPL38Q96DV4 380 aaKnown RBP11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 INSM2Q96T92 566 aaPredicted RBP11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 SLC2A9Q9NRM0 540 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 ZNF337Q9Y3M9 751 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 KLK4Q9Y5K2 254 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 K7ERU9 68 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 HLA-HP01893 362 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 RAB7AP51149 207 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 MRPS34P82930 218 aaKnown RBP11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 TUSC1Q2TAM9 212 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 YIF1BQ5BJH7 314 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 PODNL1Q6PEZ8 512 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 LRRC28Q86X40 367 aaPredicted RBP11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 KLHDC9Q8NEP7 349 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 LKAAEAR1Q8TD35 194 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 TINAGL1Q9GZM7 467 aaPredicted RBP11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 CRLF2Q9HC73 371 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 HS3ST2Q9Y278 367 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 NOSIPQ9Y314 301 aaKnown RBP11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 FAM96BQ9Y3D0 163 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 HBG1P69891 147 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 HBG2P69892 147 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 FABP9Q0Z7S8 132 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 LCN10Q6JVE6 187 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 OR5D14Q8NGL3 314 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 FAM174AQ8TBP5 190 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 ZBTB8AQ96BR9 441 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 FAM234AQ9H0X4 552 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 TAAR2Q9P1P5 351 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 CACNG3O60359 315 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 SSTR4P31391 388 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 EMP2P54851 167 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 EMP3P54852 163 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 MRPS21P82921 87 aaKnown RBP11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 OR7A5Q15622 319 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 IQCJQ1A5X6 159 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 SOHLH1Q5JUK2 328 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 RNLSQ5VYX0 342 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 TMEM184AQ6ZMB5 413 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 HPSE2Q8WWQ2 592 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 DUSP23Q9BVJ7 150 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 CXCL16Q9H2A7 254 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 ACOXLQ9NUZ1 547 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 CNOT2Q9NZN8 540 aaKnown RBP11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 LAMA4Q16363 1823 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 TAS2R46P59540 309 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 H3F3AP84243 136 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 OR1Q1Q15612 314 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 OGFOD3Q6PK18 319 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 OR51L1Q8NGJ5 315 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 OR5M8Q8NGP6 311 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 MEGF10Q96KG7 1140 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 ACSS1Q9NUB1 689 aaPredicted RBP11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 MRPL22Q9NWU5 206 aaKnown RBP11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 MTCH1Q9NZJ7 389 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 OR14J1Q9UGF5 321 aa11.21□□□□□ -0.61
ERGIC1-208ENST00000520399 CACNA1SQ13698 1873 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 LOC105371267A0A1B0GV96 52 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 LEUTXA8MZ59 168 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 CAPNS1P04632 268 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 NFYBP25208 207 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 CSNK1A1P48729 337 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 PPP2CAP67775 309 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 HTR4Q13639 388 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 TMEM31Q5JXX7 168 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 KLHDC1Q8N7A1 406 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 ESRP2Q9H6T0 727 aaKnown RBP11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 NOX3Q9HBY0 568 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 ZNF331Q9NQX6 463 aaPredicted RBP11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 INPP5EQ9NRR6 644 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 HPGDSO60760 199 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 ADH4P08319 380 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 IMPA1P29218 277 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 GJA4P35212 333 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 WBP2NLQ6ICG8 309 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 ZNF836Q6ZNA1 936 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 MEX3DQ86XN8 651 aaKnown RBP11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 CYB561A3Q8NBI2 242 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 CLEC1AQ8NC01 280 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 CPPED1Q9BRF8 314 aaPredicted RBP11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 EDEM2Q9BV94 578 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 OR51M1Q9H341 326 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 CORINQ9Y5Q5 1042 aa11.21□□□□□ -0.62
ERGIC1-208ENST00000520399 TCRBV5S1A1TA0A578 114 aa11.2□□□□□ -0.62
ERGIC1-208ENST00000520399 H3BML4 177 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms