RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TSSC4Q9Y5U2 329 aaPredicted RBP5.41□□□□□ -1.54
CTNNA1-216ENST00000519489 VPS13BQ7Z7G8 4022 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 SLC22A23A1A5C7 686 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 AP3B1O00203 1094 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 AKR1B10O60218 316 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 MFN2O95140 757 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 CYB5R3P00387 301 aaPredicted RBP5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 SNRNP70P08621 437 aaKnown RBP5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 HPGDP15428 266 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 GTF2E2P29084 291 aaKnown RBP5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 RYKP34925 604 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 MAGEA6P43360 314 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 CCR4P51679 360 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 NCBP2P52298 156 aaKnown RBP eCLIP5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 RAB1AP62820 205 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 TNFAIP6P98066 277 aaPredicted RBP5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 PDE7AQ13946 482 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 CRYMQ14894 314 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 LIPJQ5W064 366 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 Q6ZR03 302 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 VMO1Q7Z5L0 202 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 IGDCC3Q8IVU1 814 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 Q8N1X5 172 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 TXLNBQ8N3L3 684 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 FGFRL1Q8N441 504 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 C1orf52Q8N6N3 182 aaKnown RBP5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 C19orf18Q8NEA5 215 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 UBTD2Q8WUN7 234 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 SLC25A43Q8WUT9 341 aaPredicted RBP5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 MAIP1Q8WWC4 291 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 ST8SIA1Q92185 356 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 LYZL4Q96KX0 146 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 DUX3Q96PT4 197 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 P2RX4Q99571 388 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 SSX3Q99909 188 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 MCRIP2Q9BUT9 160 aaKnown RBP5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 DERL2Q9GZP9 239 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 NPFFR1Q9GZQ6 430 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 SMURF1Q9HCE7 757 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 HHATLQ9HCP6 504 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 SIRT7Q9NRC8 400 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 SERINC1Q9NRX5 453 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 SENP1Q9P0U3 644 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 OPTCQ9UBM4 332 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 CLN8Q9UBY8 286 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 MIOXQ9UGB7 285 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 ZNF256Q9Y2P7 627 aaPredicted RBP5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 ACOT9Q9Y305 439 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 KCNE3Q9Y6H6 103 aa5.4□□□□□ -1.54
CTNNA1-216ENST00000519489 TMEM72A0PK05 275 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 MAGEB16A2A368 324 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 NKX6-3A6NJ46 265 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 TRIM64CA6NLI5 447 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 UBXN8O00124 270 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 GTPBP1O00178 669 aaKnown RBP5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 OR7A17O14581 309 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 NPFFO15130 113 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 PSPNO60542 156 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 GUCY1B2O75343 617 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 SERPINA5P05154 406 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 CHN1P15882 459 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 CNTFRP26992 372 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 SAA4P35542 130 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 PMELP40967 661 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 UCP2P55851 309 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 BLCAPP62952 87 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 SLC35A1P78382 337 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 CDK16Q00536 496 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 IL5RAQ01344 420 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 RBBP4Q09028 425 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 DLG1Q12959 904 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 CBFBQ13951 182 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 ZNF404Q494X3 552 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 SGO1Q5FBB7 561 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 THEM4Q5T1C6 240 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 TRMT10BQ6PF06 316 aaKnown RBP5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 RBM43Q6ZSC3 357 aaKnown RBP5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 RNF165Q6ZSG1 346 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 OLIG3Q7RTU3 272 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 PAGE2Q7Z2X7 111 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 ZNF551Q7Z340 670 aaPredicted RBP5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 GALNT7Q86SF2 657 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 GPAT4Q86UL3 456 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 KDM8Q8N371 416 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 CCDC89Q8N998 374 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 ICA1LQ8NDH6 482 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 BEND2Q8NDZ0 799 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 OR6Y1Q8NGX8 325 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 ZNF420Q8TAQ5 688 aaPredicted RBP5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 SLC7A13Q8TCU3 470 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 ITLN1Q8WWA0 313 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 C11orf40Q8WZ69 217 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 AMDHD1Q96NU7 426 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 SF3B5Q9BWJ5 86 aaKnown RBP5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 FAIM2Q9BWQ8 316 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 EGLN1Q9GZT9 426 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 C3orf14Q9HBI5 128 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 RETNQ9HD89 108 aa5.39□□□□□ -1.55
CTNNA1-216ENST00000519489 LIPT2A6NK58 231 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms